RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CXorf65A6NEN9 183 aa21.39■■□□□ 1.01
C9orf40-201ENST00000376854 ERVK11-1P61568 191 aa21.39■■□□□ 1.01
C9orf40-201ENST00000376854 ZNF787Q6DD87 383 aa21.39■■□□□ 1.01
C9orf40-201ENST00000376854 DOCK7Q96N67 2140 aa21.39■■□□□ 1.01
C9orf40-201ENST00000376854 PRRC2CQ9Y520 2896 aaKnown RBP21.38■■□□□ 1.01
C9orf40-201ENST00000376854 ZFP92A6NM28 416 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 CEACAM6P40199 344 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 CD200P41217 278 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 GLIPR1P48060 266 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 ERVFRD-1P60508 538 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 HBG1P69891 147 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 HBG2P69892 147 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 PLA2G2CQ5R387 149 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 LCN15Q6UWW0 184 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 HAPLN4Q86UW8 402 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 LILRB2Q8N423 598 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 MDS2Q8NDY4 140 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 PPIHO43447 177 aaKnown RBP21.38■■□□□ 1.01
C9orf40-201ENST00000376854 RAB11AP62491 216 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 ZNF674Q2M3X9 581 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 ATP1A1-AS1Q5TC04 95 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.38■■□□□ 1.01
C9orf40-201ENST00000376854 MYPOPQ86VE0 399 aaPredicted RBP21.38■■□□□ 1.01
C9orf40-201ENST00000376854 PSMG3Q9BT73 122 aaPredicted RBP21.38■■□□□ 1.01
C9orf40-201ENST00000376854 ZNF665Q9H7R5 613 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 TMEM9BQ9NQ34 198 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 CISD1Q9NZ45 108 aaKnown RBP21.38■■□□□ 1.01
C9orf40-201ENST00000376854 OR14J1Q9UGF5 321 aa21.38■■□□□ 1.01
C9orf40-201ENST00000376854 NXPH2O95156 264 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 CELA3BP08861 270 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 BCL2P10415 239 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 ZNF726P1Q15940 193 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 OR2J1Q9GZK6 312 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 TMPRSS5Q9H3S3 457 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 RNF150Q9ULK6 438 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 IGHV3-64DA0A0J9YX35 117 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 LINC00587B1AMM8 73 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 CDIPTO14735 213 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 LRRC75BQ2VPJ9 315 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 DRAM1Q8N682 238 aa21.37■■□□□ 1.01
C9orf40-201ENST00000376854 ESPL1Q14674 2120 aa21.36■■□□□ 1.01
C9orf40-201ENST00000376854 TGIF2-C20orf24A0A0A6YYL0 155 aa21.36■■□□□ 1.01
C9orf40-201ENST00000376854 TNFSF15O95150 251 aa21.36■■□□□ 1.01
C9orf40-201ENST00000376854 PPP1CBP62140 327 aa21.36■■□□□ 1.01
C9orf40-201ENST00000376854 SPANXN5Q5MJ07 72 aa21.36■■□□□ 1.01
C9orf40-201ENST00000376854 MBD3L1Q8WWY6 194 aa21.36■■□□□ 1.01
C9orf40-201ENST00000376854 WDYHV1Q96HA8 205 aa21.36■■□□□ 1.01
C9orf40-201ENST00000376854 MBNL3Q9NUK0 354 aaKnown RBP21.36■■□□□ 1.01
C9orf40-201ENST00000376854 SH2D1BO14796 132 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 SMPD2O60906 423 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 FGF8P55075 233 aaPredicted RBP21.35■■□□□ 1.01
C9orf40-201ENST00000376854 FAM90A2PQ658T7 463 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 SSX7Q7RTT5 188 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 WIPI2Q9Y4P8 454 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 URB1O60287 2271 aaKnown RBP21.35■■□□□ 1.01
C9orf40-201ENST00000376854 PGA5P0DJD9 388 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 ERVS71-1P61550 626 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 RCC1LQ96I51 464 aaKnown RBP21.35■■□□□ 1.01
C9orf40-201ENST00000376854 ARHGAP21Q5T5U3 1957 aa21.35■■□□□ 1.01
C9orf40-201ENST00000376854 B4DEV8 164 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 YIF1AO95070 293 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 HOXA5P20719 270 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 SERF2P84101 59 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 ZNF146Q15072 292 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 HES3Q5TGS1 186 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 OR51M1Q9H341 326 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 J3QW42 95 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 MRPL49Q13405 166 aaKnown RBP21.34■■□□□ 1.01
C9orf40-201ENST00000376854 FGFRL1Q8N441 504 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 ZNF610Q8N9Z0 462 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 SPRR3Q9UBC9 169 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 MIOXQ9UGB7 285 aa21.34■■□□□ 1.01
C9orf40-201ENST00000376854 CD46P15529 392 aa21.33■■□□□ 1.01
C9orf40-201ENST00000376854 ALKBH6Q3KRA9 238 aa21.33■■□□□ 1.01
C9orf40-201ENST00000376854 OR4C12Q96R67 309 aa21.33■■□□□ 1.01
C9orf40-201ENST00000376854 WDR61Q9GZS3 305 aaKnown RBP21.33■■□□□ 1.01
C9orf40-201ENST00000376854 CDH20Q9HBT6 801 aa21.33■■□□□ 1.01
C9orf40-201ENST00000376854 RNF212BA8MTL3 300 aa21.33■■□□□ 1
C9orf40-201ENST00000376854 CYB5BO43169 146 aa21.33■■□□□ 1
C9orf40-201ENST00000376854 IDH3GP51553 393 aaPredicted RBP21.33■■□□□ 1
C9orf40-201ENST00000376854 NDUFA6P56556 154 aa21.33■■□□□ 1
C9orf40-201ENST00000376854 FAM180AQ6UWF9 173 aa21.33■■□□□ 1
C9orf40-201ENST00000376854 TRGV5A0A0B4J1U4 118 aa21.32■■□□□ 1
C9orf40-201ENST00000376854 GRPP07492 148 aa21.32■■□□□ 1
C9orf40-201ENST00000376854 TMEM41BQ5BJD5 291 aa21.32■■□□□ 1
C9orf40-201ENST00000376854 MED12LQ86YW9 2145 aa21.32■■□□□ 1
C9orf40-201ENST00000376854 FER1L6-AS2Q96M78 137 aa21.32■■□□□ 1
C9orf40-201ENST00000376854 TOLLIPQ9H0E2 274 aa21.32■■□□□ 1
C9orf40-201ENST00000376854 DOK5Q9P104 306 aa21.32■■□□□ 1
C9orf40-201ENST00000376854 CEBPDP49716 269 aaPredicted RBP21.31■■□□□ 1
C9orf40-201ENST00000376854 ELLP55199 621 aaPredicted RBP21.31■■□□□ 1
C9orf40-201ENST00000376854 PNRC1Q12796 327 aaPredicted RBP21.31■■□□□ 1
C9orf40-201ENST00000376854 ACSF3Q4G176 576 aaPredicted RBP21.31■■□□□ 1
C9orf40-201ENST00000376854 RNFT1Q5M7Z0 435 aa21.31■■□□□ 1
C9orf40-201ENST00000376854 CA5BP1Q8WTZ4 195 aa21.31■■□□□ 1
C9orf40-201ENST00000376854 PARD6GQ9BYG4 376 aaPredicted RBP21.31■■□□□ 1
C9orf40-201ENST00000376854 LOC400499M0QZD8 3231 aa21.31■■□□□ 1
C9orf40-201ENST00000376854 UBE2L5PA0A1B0GUS4 154 aa21.3■■□□□ 1
C9orf40-201ENST00000376854 FAM90A26D6RGX4 464 aa21.3■■□□□ 1
C9orf40-201ENST00000376854 SELEP16581 610 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms