RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZBTB34Q8NCN2 500 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 RNF133Q8WVZ7 376 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 CCL17Q92583 94 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 GHITMQ9H3K2 345 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 LYZL6O75951 148 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 COX7A1P24310 79 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 SLC25A33Q9BSK2 321 aa10.71□□□□□ -0.69
NPLOC4-202ENST00000374747 C10orf113Q5VZT2 155 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 OR8A1Q8NGG7 326 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 OR4C12Q96R67 309 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 MRPL37Q9BZE1 423 aaKnown RBP10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 CHRNA10Q9GZZ6 450 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 PRNDQ9UKY0 176 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 NOTCH4Q99466 2003 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 UNC13CQ8NB66 2214 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 SPAARA0A1B0GVQ0 90 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 CYB5R3P00387 301 aaPredicted RBP10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 AREGP15514 252 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 SPINK14Q6IE38 97 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 SLC23A3Q6PIS1 610 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 SLC26A1Q9H2B4 701 aa10.71□□□□□ -0.7
NPLOC4-202ENST00000374747 MFSD2BA6NFX1 497 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 MMP16P51512 607 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 FAM219AQ8IW50 185 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 FLYWCH2Q96CP2 140 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 KLK13Q9UKR3 277 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 GAPDHP04406 335 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 TEPPQ6URK8 271 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 TMEM108Q6UXF1 575 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 CYB561D1Q8N8Q1 229 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 FAM186AA6NE01 2351 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 CA11O75493 328 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 GZMHP20718 246 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 ZNF738Q8NE65 137 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 OR2V2Q96R30 315 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 CHST5Q9GZS9 411 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 RALYQ9UKM9 306 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 SCN3AQ9NY46 2000 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 ZNF205O95201 554 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 CD1AP06126 327 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 OR4A8P0C604 315 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 DLX1P56177 255 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 SERF2P84101 59 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 ZNF788Q6ZQV5 615 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 TGIF2LYQ8IUE0 185 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 OR4X1Q8NH49 305 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 SGMS2Q8NHU3 365 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 ZNF519Q8TB69 540 aa10.7□□□□□ -0.7
NPLOC4-202ENST00000374747 FRYLO94915 3013 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 GNG7O60262 68 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 ADRA2AP08913 450 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 VSIG10L2P0DP72 767 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 SRP14P37108 136 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 PUSL1Q8N0Z8 303 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 DDA1Q9BW61 102 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 ZFP30Q9Y2G7 519 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 H3BVH4 76 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 RPL36A-HNRNPH2H7BZ11 118 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 DNASE2O00115 360 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 MGAT2Q10469 447 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 DCAF10Q5QP82 559 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 STPG1Q5TH74 334 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 DCAF12L2Q5VW00 463 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 LINC00596Q86U02 117 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 MYOZ3Q8TDC0 251 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 SPTBN5Q9NRC6 3674 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 J3QT63 122 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 CCL3P10147 92 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 NPY1RP25929 384 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 PIGYQ3MUY2 71 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 FBLIM1Q8WUP2 373 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 ADAT3Q96EY9 351 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 TMEM38BQ9NVV0 291 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 AURKAIP1Q9NWT8 199 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 GCGP01275 180 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 PSG2P11465 335 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 GGTLC2Q14390 218 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 TMEM140Q9NV12 185 aa10.69□□□□□ -0.7
NPLOC4-202ENST00000374747 TRAV38-1A0A0B4J264 116 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 KLF7O75840 302 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 IGKV1D-16P01601 117 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 BGLAPP02818 100 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 RASL11BQ9BPW5 248 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 TMEM204Q9BSN7 226 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 TMEM208Q9BTX3 173 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 C4orf51C9J302 202 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 CDIPTO14735 213 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 PPIHO43447 177 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 PRSS53Q2L4Q9 553 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 LDLRAD3Q86YD5 345 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 OR1K1Q8NGR3 316 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 TMEM74BQ9NUR3 256 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 NPTNQ9Y639 398 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 DNPH1O43598 174 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 MT-ND6P03923 174 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 ZNF660Q6AZW8 331 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 OR4A47Q6IF82 309 aa10.68□□□□□ -0.7
NPLOC4-202ENST00000374747 OR5A2Q8NGI9 324 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms