RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 URGCP-MRPS24S4R325 110 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 CDX4O14627 284 aaPredicted RBP15.21■□□□□ 0.03
PHF1-201ENST00000374512 PPP1R2P9O14990 202 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 NKX6-1P78426 367 aaPredicted RBP15.21■□□□□ 0.03
PHF1-201ENST00000374512 PLGLB1Q02325 96 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 ZNF497Q6ZNH5 498 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 TMEM251Q8N6I4 163 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 CA5BP1Q8WTZ4 195 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 IL1F10Q8WWZ1 152 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 RSG1Q9BU20 258 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 SDF2L1Q9HCN8 221 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 TMEM9BQ9NQ34 198 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 OR14J1Q9UGF5 321 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 TINAGQ9UJW2 476 aa15.21■□□□□ 0.03
PHF1-201ENST00000374512 TRBV24-1A0A075B6N3 115 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 IGKV1-5P01602 117 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 OPN1MWP04001 364 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 OPN1MW2P0DN77 364 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 OPN1MW3P0DN78 364 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 CLN3Q13286 438 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 LILRB2Q8N423 598 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 NANOS1Q8WY41 292 aaKnown RBP15.2■□□□□ 0.02
PHF1-201ENST00000374512 RCC1LQ96I51 464 aaKnown RBP15.2■□□□□ 0.02
PHF1-201ENST00000374512 RTL8AQ9BWD3 113 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 WDR61Q9GZS3 305 aaKnown RBP15.2■□□□□ 0.02
PHF1-201ENST00000374512 PLA2G3Q9NZ20 509 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 OR1A1Q9P1Q5 309 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 ZFP92A6NM28 416 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 ZNF729A6NN14 1252 aaPredicted RBP15.2■□□□□ 0.02
PHF1-201ENST00000374512 METTL15P1P0C7V9 234 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 WNT5AP41221 380 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 LINC00696Q6ZRV3 163 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 AHCTF1Q8WYP5 2266 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 ZNF665Q9H7R5 613 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 POLDIP2Q9Y2S7 368 aa15.2■□□□□ 0.02
PHF1-201ENST00000374512 MT-CO3P00414 261 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 ZNF726P1Q15940 193 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 ZNF585BQ52M93 769 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 PYY3Q5JQD4 70 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 CENPVQ7Z7K6 275 aaPredicted RBP15.19■□□□□ 0.02
PHF1-201ENST00000374512 MCEMP1Q8IX19 187 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 ZBTB34Q8NCN2 500 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 AGMATQ9BSE5 352 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 MBNL3Q9NUK0 354 aaKnown RBP15.19■□□□□ 0.02
PHF1-201ENST00000374512 WIPI2Q9Y4P8 454 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 ZNHIT1O43257 154 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 TRGC2P03986 189 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 ARL16Q0P5N6 197 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 LCN15Q6UWW0 184 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 C17orf78Q8N4C9 275 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 PPP1R3CQ9UQK1 317 aa15.19■□□□□ 0.02
PHF1-201ENST00000374512 RBM7Q9Y580 266 aaKnown RBP15.19■□□□□ 0.02
PHF1-201ENST00000374512 NCOR1O75376 2440 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 GPR179Q6PRD1 2367 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 DNAJC13O75165 2243 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 PTBP3O95758 552 aaKnown RBP15.18■□□□□ 0.02
PHF1-201ENST00000374512 IAPPP10997 89 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 CA6P23280 308 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 ERVK11-1P61568 191 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 HAPLN4Q86UW8 402 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 TRAPPC2LQ9UL33 140 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 KNTC1P50748 2209 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 ZNF407Q9C0G0 2248 aa15.18■□□□□ 0.02
PHF1-201ENST00000374512 LILRA1O75019 489 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 RHBDL1O75783 438 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 ATP6V1FQ16864 119 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 HIST3H2BBQ8N257 126 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 TAF15Q92804 592 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHF1-201ENST00000374512 ARHGAP21Q5T5U3 1957 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 MAP1LC3B2A6NCE7 125 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 ZNF146Q15072 292 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 IZUMO4Q1ZYL8 232 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 OR2B11Q5JQS5 317 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 OR2T2Q6IF00 324 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 TMEM14EPQ6UXP3 125 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 SPNS3Q6ZMD2 512 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 OR1K1Q8NGR3 316 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 OR4C12Q96R67 309 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 MAP1LC3BQ9GZQ8 125 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 VSIRQ9H7M9 311 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 GP6Q9HCN6 339 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 WDFY4Q6ZS81 3184 aa15.17■□□□□ 0.02
PHF1-201ENST00000374512 FREM2Q5SZK8 3169 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 OR2H2O95918 312 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 MEOX1P50221 254 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 NUFIP2Q7Z417 695 aaKnown RBP15.16■□□□□ 0.02
PHF1-201ENST00000374512 BCL2L2Q92843 193 aaPredicted RBP15.16■□□□□ 0.02
PHF1-201ENST00000374512 NAT8Q9UHE5 227 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 KCNS2Q9ULS6 477 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 KLF13Q9Y2Y9 288 aaPredicted RBP15.16■□□□□ 0.02
PHF1-201ENST00000374512 SH2D1BO14796 132 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 MBP02144 154 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 SP1P08047 785 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 SLC38A11Q08AI6 406 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 MSMO1Q15800 293 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 WDR25Q64LD2 544 aaPredicted RBP15.16■□□□□ 0.02
PHF1-201ENST00000374512 FGFRL1Q8N441 504 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 SLC39A9Q9NUM3 307 aa15.16■□□□□ 0.02
PHF1-201ENST00000374512 ARGFXA6NJG6 315 aa15.15■□□□□ 0.02
PHF1-201ENST00000374512 CEBPZOSA8MTT3 80 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms