RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 OR2V2Q96R30 315 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 UQCC1Q9NVA1 299 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 COL4A2P08572 1712 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 CLEC18AA5D8T8 446 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 CTXN2P0C2S0 81 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 GPR12P47775 334 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 NPBWR1P48145 328 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 RAB5BP61020 215 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 ZNF345Q14585 488 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 FAM185AQ8N0U4 392 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 CLEC18CQ8NCF0 446 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 NTNG2Q96CW9 530 aa11.2□□□□□ -0.62
NCDN-203ENST00000373253 IGKV3D-15A0A087WSY6 115 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 KIAA1324LA8MWY0 1029 aaPredicted RBP11.19□□□□□ -0.62
NCDN-203ENST00000373253 UMAD1C9J7I0 102 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 PSPNO60542 156 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 FAM87AP0C7U9 286 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 F2RP25116 425 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 MPV17LQ2QL34 196 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 LINC00470Q9BZP3 86 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 TMEM222Q9H0R3 208 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 NDRG3Q9UGV2 375 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 PTPN13Q12923 2485 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 COL12A1Q99715 3063 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 TMEM30CPA0ZSE6 113 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 GPR137BO60478 399 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 SNAPINO95295 136 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 APELAP0DMC3 54 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 VDAC1P21796 283 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 ATP6V0CP27449 155 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 KIR2DL2P43627 348 aaPredicted RBP11.19□□□□□ -0.62
NCDN-203ENST00000373253 HERPUD1Q15011 391 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 GUK1Q16774 197 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 SMIM21Q3B7S5 101 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 PRAMEF5Q5TYX0 476 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 Q6ZT83 130 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 HSD17B13Q7Z5P4 300 aaPredicted RBP11.19□□□□□ -0.62
NCDN-203ENST00000373253 FAM90A27PA6NNH2 459 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 TMPRSS2O15393 492 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 HBZP02008 142 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 ZNF266Q14584 549 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 CRIP3Q6Q6R5 217 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 ITLN1Q8WWA0 313 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 RSRP1Q9BUV0 290 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 OPA3Q9H6K4 179 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 C19orf12Q9NSK7 152 aa11.19□□□□□ -0.62
NCDN-203ENST00000373253 CPAMD8Q8IZJ3 1885 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 SRPXP78539 464 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 GABRA6Q16445 453 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 LDLRAD3Q86YD5 345 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 LYG1Q8N1E2 194 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 TMEM252Q8N6L7 170 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 GPR146Q96CH1 333 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 RNF122Q9H9V4 155 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 ZFP57Q9NU63 452 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 MMP24Q9Y5R2 645 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 REG1BP48304 166 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 F2RL1P55085 397 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 ERVFRD-1P60508 538 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 CATR1Q13166 79 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 C21orf62-AS1Q17RA5 79 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 RND1Q92730 232 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 RARRES2Q99969 163 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 DOPEY2Q9Y3R5 2298 aa11.18□□□□□ -0.62
NCDN-203ENST00000373253 SETD2Q9BYW2 2564 aaPredicted RBP11.18□□□□□ -0.62
NCDN-203ENST00000373253 C1orf196B1AJZ1 125 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 CYB5R3P00387 301 aaPredicted RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 DEFA4P12838 97 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 KIAA0141Q14154 515 aaPredicted RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 FOXL2NBQ6ZUU3 175 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 PBDC1Q9BVG4 233 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 ZZEF1O43149 2961 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 TNRC6AQ8NDV7 1962 aaKnown RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 PRR33A8MZF0 331 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 IGSF23A1L1A6 192 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 TAAR5O14804 337 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 PTBP3O95758 552 aaKnown RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 HNF1AP20823 631 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 TMEM42Q69YG0 159 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 INO80CQ6PI98 192 aaPredicted RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 CCL13Q99616 98 aa11.17□□□□□ -0.62
NCDN-203ENST00000373253 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 USP9YO00507 2555 aaPredicted RBP11.17□□□□□ -0.62
NCDN-203ENST00000373253 TUBAL3A6NHL2 446 aa11.16□□□□□ -0.62
NCDN-203ENST00000373253 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
NCDN-203ENST00000373253 RPS2P15880 293 aaKnown RBP11.16□□□□□ -0.62
NCDN-203ENST00000373253 RPS10P46783 165 aaKnown RBP11.16□□□□□ -0.62
NCDN-203ENST00000373253 DHODHQ02127 395 aa11.16□□□□□ -0.62
NCDN-203ENST00000373253 DBX2Q6ZNG2 339 aa11.16□□□□□ -0.62
NCDN-203ENST00000373253 PPP1R35Q8TAP8 253 aa11.16□□□□□ -0.62
NCDN-203ENST00000373253 SPRY4Q9C004 299 aa11.16□□□□□ -0.62
NCDN-203ENST00000373253 WFDC1Q9HC57 220 aa11.16□□□□□ -0.62
NCDN-203ENST00000373253 MYOZ1Q9NP98 299 aaPredicted RBP11.16□□□□□ -0.62
NCDN-203ENST00000373253 DECR2Q9NUI1 292 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms