RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PKNOX2Q96KN3 472 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 DPY30Q9C005 99 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 NANOGQ9H9S0 305 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 TMEM38BQ9NVV0 291 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 TAS2R5Q9NYW4 299 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 UBAP1Q9NZ09 502 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 POFUT2Q9Y2G5 429 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 INSIG2Q9Y5U4 225 aa3.78□□□□□ -1.8
RNU4-39P-201ENST00000362455 TRAV36DV7A0A075B6V5 113 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 A0A096LPI6 279 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 IGKV1D-43A0A0B4J1Z2 117 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 IGKV1D-13A0A0B4J2D9 117 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 A8MU10 97 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 CLDN25C9JDP6 229 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 DLGAP1O14490 977 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 DYNC1I1O14576 645 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 SNAP29O95721 258 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 RAB36O95755 333 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 TSPAN13O95857 204 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 IGHMP01871 453 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 BCHEP06276 602 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 IGKV1-13P0DP09 117 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 S100A3P33764 101 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 KLF3P57682 345 aaPredicted RBP3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 COPZ1P61923 177 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 RPS23P62266 143 aaKnown RBP3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 GNA13Q14344 377 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 HIST3H3Q16695 136 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 DEFB112Q30KQ8 113 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 THEM4Q5T1C6 240 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 Q6ZR03 302 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 LRRC28Q86X40 367 aaPredicted RBP3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 MSRB3Q8IXL7 192 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC22A24Q8N4F4 322 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 TEX29Q8N6K0 151 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR4K5Q8NGD3 323 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR1N2Q8NGR9 330 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 RAB1CQ92928 201 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC38A4Q969I6 547 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 SGK3Q96BR1 496 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 PANX1Q96RD7 426 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 ATP5SQ99766 215 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 RHOXF2Q9BQY4 288 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 ULBP2Q9BZM5 246 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 C12orf10Q9HB07 376 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 PATZ1Q9HBE1 687 aaKnown RBP3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 PITPNC1Q9UKF7 332 aa3.77□□□□□ -1.81
RNU4-39P-201ENST00000362455 DYNC2H1Q8NCM8 4307 aaKnown RBP3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 A0A0B4J2E0 115 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 A0A1B0GX12 115 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 CLPSL1A2RUU4 121 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 ISPDA4D126 451 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 RAB29O14966 203 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC31A2O15432 143 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR2T1O43869 369 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 FOXH1O75593 365 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 EIF3GO75821 320 aaKnown RBP eCLIP3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR2J3O76001 311 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 UBL3O95164 117 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 DNAH10OSP0CZ25 163 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 PGA4P0DJD7 388 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 PGA3P0DJD8 388 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 SERPINB5P36952 375 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 CRATP43155 626 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 CSNK1A1P48729 337 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 ERFP50548 548 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 CRISP3P54108 245 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 UGT2B15P54855 530 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 DSTNP60981 165 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 HPCAP84074 193 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 PMS2P3Q13401 168 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 RGNQ15493 299 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR1Q1Q15612 314 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 MRPL23Q16540 153 aaKnown RBP3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 KRT71Q3SY84 523 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 PABPC1L2AQ5JQF8 200 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 SPANXN2Q5MJ10 180 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 VAX1Q5SQQ9 334 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 BRD3OSQ6XYD6 125 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 IFT20Q8IY31 132 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 FAM71E2Q8N5Q1 922 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 ZNF283Q8N7M2 679 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 NPBQ8NG41 125 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR4D11Q8NGI4 311 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR52E2Q8NGJ4 325 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR10G9Q8NGN4 311 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR6N1Q8NGY5 312 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR6X1Q8NH79 312 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC25A40Q8TBP6 338 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 KLF14Q8TD94 323 aaPredicted RBP3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 C10orf82Q8WW14 230 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 C11orf40Q8WZ69 217 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 SLC35B4Q969S0 331 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 MCUR1Q96AQ8 359 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR52E6Q96RD3 313 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 BCL2L14Q9BZR8 327 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 OR2J1Q9GZK6 312 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 WDR55Q9H6Y2 383 aaPredicted RBP3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 TPT1P8Q9HAU6 139 aa3.76□□□□□ -1.81
RNU4-39P-201ENST00000362455 TMEM165Q9HC07 324 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms