RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 IGLV3-12A0A075B6K2 115 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 A0A0G2JMM0 328 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1W2PPB8 328 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1W2PQF6 199 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 KIR3DP1A8MWS1 328 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 TGFBR3LH3BV60 316 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 HS3ST1O14792 307 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 SIVA1O15304 175 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 KBTBD11O94819 623 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 TTRP02766 147 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 CCKBRP32239 447 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 ID1P41134 155 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 LHX2P50458 406 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 IL13RA2Q14627 380 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 CD300EQ496F6 205 aaPredicted RBP5.7□□□□□ -1.5
ZNF540-201ENST00000316433 FAM78BQ5VT40 261 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 OOSP2Q86WS3 158 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 FBXL14Q8N1E6 418 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 SLC25A40Q8TBP6 338 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 FAM46BQ96A09 425 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 MRPL24Q96A35 216 aaKnown RBP5.7□□□□□ -1.5
ZNF540-201ENST00000316433 LINC00470Q9BZP3 86 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 C11orf1Q9H5F2 150 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 ZDHHC11Q9H8X9 412 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 NRN1Q9NPD7 142 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 IL36GQ9NZH8 169 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 DOCK8Q8NF50 2099 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1W2PQU0 124 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 CEBPZOSA8MTT3 80 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF732B4DXR9 585 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 PLPP3O14495 311 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 NUDT3O95989 172 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 PGCP20142 388 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 SFTPDP35247 375 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 OPRM1P35372 400 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 TAS2R46P59540 309 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 PPP1CBP62140 327 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 EWSR1Q01844 656 aaKnown RBP eCLIP5.69□□□□□ -1.5
ZNF540-201ENST00000316433 POU3F1Q03052 451 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-201ENST00000316433 MFGE8Q08431 387 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-201ENST00000316433 OR8B8Q15620 311 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 RAB30Q15771 203 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 PMCHL1Q16048 86 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 RNFT1Q5M7Z0 435 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 OR10V1Q8NGI7 309 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 OR5H2Q8NGV7 314 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 ZPLD1Q8TCW7 415 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 BLNKQ8WV28 456 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 GNPNAT1Q96EK6 184 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-201ENST00000316433 ZC2HC1AQ96GY0 325 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF665Q9H7R5 613 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 LRIT1Q9P2V4 623 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 DHDHQ9UQ10 334 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 GLOD5A6NK44 160 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 SIRPB1O00241 398 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 MPPED1O15442 326 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 PITX3O75364 302 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 C8orf89P0DMQ9 161 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 YPEL3P61236 119 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-201ENST00000316433 RNPS1Q15287 305 aaKnown RBP5.69□□□□□ -1.5
ZNF540-201ENST00000316433 STUMQ69YW2 141 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 C12orf54Q6X4T0 127 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 ATOH7Q8N100 152 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 RBM24Q9BX46 236 aaKnown RBP5.69□□□□□ -1.5
ZNF540-201ENST00000316433 YAE1D1Q9NRH1 226 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 FGF21Q9NSA1 209 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 COPS7AQ9UBW8 275 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF391Q9UJN7 358 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 HCFC2Q9Y5Z7 792 aa5.69□□□□□ -1.5
ZNF540-201ENST00000316433 TRAV9-2A0A087WT02 112 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 LINC01553A4QN01 128 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 OTOL1A6NHN0 477 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-201ENST00000316433 IFNA5P01569 189 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 C3orf79P0CE67 100 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FBLP22087 321 aaKnown RBP5.68□□□□□ -1.5
ZNF540-201ENST00000316433 GATA3P23771 443 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 RRADP55042 308 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 PIGPP57054 158 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 TMEM196Q5HYL7 178 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF787Q6DD87 383 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 TCF23Q7RTU1 214 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 OR10P1Q8NGE3 313 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 OR13G1Q8NGZ3 307 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 C16orf52Q8NHV5 167 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF721Q8TF20 911 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 EMG1Q92979 244 aaKnown RBP5.68□□□□□ -1.5
ZNF540-201ENST00000316433 DGAT2Q96PD7 388 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 NPFFR1Q9GZQ6 430 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 B3GALT5Q9Y2C3 310 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 TSSC4Q9Y5U2 329 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1W2PR80 420 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A10PA6NDY2 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A18PA6NE21 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A16PA6NEW6 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A20PA6NIJ5 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A8PA6NJQ4 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A7PA6NKC0 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A22PA8MWA6 464 aa5.68□□□□□ -1.5
ZNF540-201ENST00000316433 FAM90A12PA8MX19 464 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms