RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 NEU3Q9UQ49 428 aa13.8□□□□□ -0.2
PPM1E-201ENST00000308249 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
PPM1E-201ENST00000308249 CELA2BP08218 269 aaPredicted RBP13.79□□□□□ -0.2
PPM1E-201ENST00000308249 ARF6P62330 175 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 Q5PR19 223 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 ABHD1Q96SE0 405 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 IGHV3-35A0A0C4DH35 117 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 RUNX1Q01196 453 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 PQLC2Q6ZP29 291 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 OR2H1Q9GZK4 316 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 MRM2Q9UI43 246 aaKnown RBP13.79□□□□□ -0.2
PPM1E-201ENST00000308249 ARHGEF28Q8N1W1 1705 aaKnown RBP13.79□□□□□ -0.2
PPM1E-201ENST00000308249 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
PPM1E-201ENST00000308249 ERGP11308 486 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 ANKRD33Q7Z3H0 272 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 KIR2DL4Q99706 377 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 ALKBH7Q9BT30 221 aaPredicted RBP13.79□□□□□ -0.2
PPM1E-201ENST00000308249 DIRC2Q96SL1 478 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 FRRS1LQ9P0K9 344 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 C1QTNF9BB2RNN3 333 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 REG1AP05451 166 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 C9orf50Q5SZB4 431 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 C10orf128Q5T292 105 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 SLC25A34Q6PIV7 304 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 SPEF2Q9C093 1822 aa13.79□□□□□ -0.2
PPM1E-201ENST00000308249 RNASEH2CQ8TDP1 164 aaKnown RBP13.78□□□□□ -0.2
PPM1E-201ENST00000308249 WFIKKN1Q96NZ8 548 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 TMEM70Q9BUB7 260 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 WIPI2Q9Y4P8 454 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 TDGF1P13385 188 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 NFAM1Q8NET5 270 aaPredicted RBP13.78□□□□□ -0.2
PPM1E-201ENST00000308249 OR1P1Q8NH06 330 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 NPVFQ9HCQ7 196 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 CYB561D1Q8N8Q1 229 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 PRR32B1ATL7 298 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 J3QT63 122 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 CT62P0C5K7 136 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 RAE1P78406 368 aaKnown RBP13.78□□□□□ -0.2
PPM1E-201ENST00000308249 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 C1QL3Q5VWW1 255 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 OR5AN1Q8NGI8 311 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 PLPPR5Q32ZL2 321 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
PPM1E-201ENST00000308249 IGHV3OR16-13A0A075B7E8 117 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 IGHV3-74A0A0B4J1X5 117 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 LEUTXA8MZ59 168 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 SLIRPQ9GZT3 109 aaKnown RBP13.77□□□□□ -0.2
PPM1E-201ENST00000308249 MRPL18Q9H0U6 180 aaKnown RBP13.77□□□□□ -0.2
PPM1E-201ENST00000308249 R3HDMLQ9H3Y0 253 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 TNFSF14O43557 240 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 KLK8O60259 260 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 SMIM13P0DJ93 91 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 NKG7Q16617 165 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 UCN2Q96RP3 112 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 RBKSQ9H477 322 aa13.77□□□□□ -0.2
PPM1E-201ENST00000308249 ATP5G2Q06055 141 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 MEF2CQ06413 473 aaPredicted RBP13.77□□□□□ -0.21
PPM1E-201ENST00000308249 PMS2CLQ68D20 193 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 BIVMQ86UB2 503 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 LRRC3BQ96PB8 259 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 MMP16P51512 607 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 HIST1H1AQ02539 215 aaPredicted RBP13.77□□□□□ -0.21
PPM1E-201ENST00000308249 SPAARA0A1B0GVQ0 90 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 PRR35P0CG20 571 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 HOXB3P14651 431 aaPredicted RBP13.77□□□□□ -0.21
PPM1E-201ENST00000308249 SERGEFQ9UGK8 458 aa13.77□□□□□ -0.21
PPM1E-201ENST00000308249 RIMBP3CA6NJZ7 1639 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 RIMBP3BA6NNM3 1639 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 RIMBP3Q9UFD9 1639 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 IGHV3-66A0A0C4DH42 116 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 RPL36A-HNRNPH2H7BZ11 118 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 EIF3GO75821 320 aaKnown RBP eCLIP13.76□□□□□ -0.21
PPM1E-201ENST00000308249 TRGC2P03986 189 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 C18orf15Q96N68 181 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 FGF9P31371 208 aaPredicted RBP13.76□□□□□ -0.21
PPM1E-201ENST00000308249 FAM159AQ6UWV7 190 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 TRBV20OR9-2A0A075B6H5 130 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 SAA1P0DJI8 122 aaPredicted RBP13.76□□□□□ -0.21
PPM1E-201ENST00000308249 CCL4P13236 92 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 CXCL3P19876 107 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 S1PR2O95136 353 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 AMY1AP04745 511 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 TMEM229AB2RXF0 380 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 CEACAM4O75871 244 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 EFNB2P52799 333 aa13.76□□□□□ -0.21
PPM1E-201ENST00000308249 MESTQ5EB52 335 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 RASL10BQ96S79 203 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 PLA2G2FQ9BZM2 168 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 HPRT1P00492 218 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 TYMSP04818 313 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 CFAP161Q6P656 301 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 ITLN2Q8WWU7 325 aaPredicted RBP13.75□□□□□ -0.21
PPM1E-201ENST00000308249 TNFRSF18Q9Y5U5 241 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 SNAI2O43623 268 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 HLA-DRB1P01911 266 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 TP53I13Q8NBR0 393 aaPredicted RBP13.75□□□□□ -0.21
PPM1E-201ENST00000308249 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
PPM1E-201ENST00000308249 TSPOP30536 169 aa13.75□□□□□ -0.21
PPM1E-201ENST00000308249 SURF2Q15527 256 aaPredicted RBP13.75□□□□□ -0.21
PPM1E-201ENST00000308249 MYH13Q9UKX3 1938 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms