RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GSTP1P09211 210 aaKnown RBP5.26□□□□□ -1.57
CD44-204ENST00000279452 FAM106CPP0CH98 169 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 TMEM11P17152 192 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 SOX6P35712 828 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 CEACAM6P40199 344 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 RPL5P46777 297 aaKnown RBP5.26□□□□□ -1.57
CD44-204ENST00000279452 ALDH3B2P48448 385 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 ARPC4P59998 168 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 RPL15P61313 204 aaKnown RBP5.26□□□□□ -1.57
CD44-204ENST00000279452 HTD2P86397 168 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 MORN2Q502X0 79 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 CT45A1Q5HYN5 189 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 TMEM69Q5SWH9 247 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 HACD4Q5VWC8 232 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 MZT2AQ6P582 158 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 Q6ZPA2 131 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 Q6ZSV7 163 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 SLC25A48Q6ZT89 311 aaKnown RBP5.26□□□□□ -1.57
CD44-204ENST00000279452 ANKRD13BQ86YJ7 626 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 DRAM1Q8N682 238 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 OR10J5Q8NHC4 309 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 OR2T6Q8NHC8 308 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 CT45A3Q8NHU0 189 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 SPATA3Q8NHX4 192 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 S100A16Q96FQ6 103 aaKnown RBP5.26□□□□□ -1.57
CD44-204ENST00000279452 OCSTAMPQ9BR26 566 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 SLC25A33Q9BSK2 321 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 IFT46Q9NQC8 304 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 ELF5Q9UKW6 265 aaPredicted RBP5.26□□□□□ -1.57
CD44-204ENST00000279452 SPATA2Q9UM82 520 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 MRPS7Q9Y2R9 242 aaKnown RBP5.26□□□□□ -1.57
CD44-204ENST00000279452 KCNK7Q9Y2U2 307 aa5.26□□□□□ -1.57
CD44-204ENST00000279452 NF1P21359 2839 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 SAA2-SAA4A0A096LPE2 208 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 TRBV6-6A0A0A6YYG2 114 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 IGHV1-3A0A0C4DH29 117 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 SMIM31A0A1B0GVY4 71 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 A0A1W2PPI3 338 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 MEIS3P1A6NDR6 274 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 A6NDX4 124 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 NCBP2LA6PVI3 153 aaKnown RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 J3QRK9 145 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 RGS5O15539 181 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 YPEL1O60688 119 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 HPGDSO60760 199 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 TMEM127O75204 238 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 NDUFA7O95182 113 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 EIF4EP06730 217 aaKnown RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 GSTT2P0CG29 244 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 GSTT2BP0CG30 244 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 SAA2P0DJI9 122 aaPredicted RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 VSIG10L2P0DP72 767 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 PTHLHP12272 177 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 GPR12P47775 334 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 OR3A3P47888 321 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 DYNLT3P51808 116 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 ZNF134P52741 427 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 PITPNAQ00169 270 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 RELBQ01201 579 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 ZNF816Q0VGE8 651 aaPredicted RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 CTF1Q16619 201 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 PNLIPRP3Q17RR3 467 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 ZNF260Q3ZCT1 412 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 Q3ZCU0 254 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 IGSF11Q5DX21 431 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 RNASE12Q5GAN4 147 aaKnown RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 ZNF880Q6PDB4 577 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 CCBE1Q6UXH8 406 aaPredicted RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 OR8H3Q8N146 312 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 LINC00311Q8N616 119 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 C8orf31Q8N9H6 132 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 ZNF439Q8NDP4 499 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 OR4A4PQ8NGN8 299 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 PIFOQ8TCI5 191 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 RAB2BQ8WUD1 216 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 RTN4IP1Q8WWV3 396 aaPredicted RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 EDARADDQ8WWZ3 215 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 ACOT12Q8WYK0 555 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 ABHD14BQ96IU4 210 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 YPEL2Q96QA6 119 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 S1PR3Q99500 378 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 PARP12Q9H0J9 701 aaKnown RBP5.25□□□□□ -1.57
CD44-204ENST00000279452 RDH8Q9NYR8 311 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 ZNF221Q9UK13 617 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 RNF150Q9ULK6 438 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 SIGLEC9Q9Y336 463 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 RNF114Q9Y508 228 aa5.25□□□□□ -1.57
CD44-204ENST00000279452 NAV3Q8IVL0 2385 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 A0A0A6YYH2 397 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 A0A1B0GUS0 222 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 CLPSL1A2RUU4 121 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 A6NJ64 397 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 SH2D7A6NKC9 451 aaPredicted RBP5.24□□□□□ -1.57
CD44-204ENST00000279452 POM121CA8CG34 1229 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 LY6LH3BQJ8 138 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 H7C2Y5 167 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 RAB29O14966 203 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 OR2F2O95006 317 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 OR8U9P0C7N5 309 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 ZNF182P17025 639 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms