RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 SF3B6Q9Y3B4 125 aaKnown RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 MBNL2Q5VZF2 373 aaKnown RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 DNASE2BQ8WZ79 361 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 CNRIP1Q96F85 164 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 CYB5R1Q9UHQ9 305 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 SMIM18P0DKX4 95 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 ATP5G2Q06055 141 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 KLF9Q13886 244 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 NFAM1Q8NET5 270 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 DXOO77932 396 aaKnown RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 HMGA1P17096 107 aaKnown RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 RELQ04864 619 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-201ENST00000263708 ALG14Q96F25 216 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 SYT11Q9BT88 431 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 NPBWR2P48146 333 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 MARVELD3Q96A59 401 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 DOCK7Q96N67 2140 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 SLC25A17O43808 307 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 GPBAR1Q8TDU6 330 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 LHX9Q9NQ69 397 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
PTPN4-201ENST00000263708 TMEM127O75204 238 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 ZFPL1O95159 310 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 GZMHP20718 246 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 UNQ5815/PRO19632Q6UWF5 114 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 KIR2DL4Q99706 377 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 TRAV21A0A0B4J279 112 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 TDGF1P13385 188 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 TSPOP30536 169 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 TMEM196Q5HYL7 178 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 TEX30Q5JUR7 227 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 PWWP2BQ6NUJ5 590 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 ASB1Q9Y576 335 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 SLC25A20O43772 301 aa9.96□□□□□ -0.81
PTPN4-201ENST00000263708 IGHV3OR16-10A0A075B7F0 116 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 SSTR5P35346 364 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 CCL28Q9NRJ3 127 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 CCL8P80075 99 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 IL19Q9UHD0 177 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 TRBV7-9A0A0J9YWB2 115 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 ADAP1O75689 374 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 CLDN14O95500 239 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 CTLA4P16410 223 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 CXorf66Q5JRM2 361 aaPredicted RBP9.96□□□□□ -0.82
PTPN4-201ENST00000263708 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 PMS2CLQ68D20 193 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 TMEM70Q9BUB7 260 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 JKAMPQ9P055 326 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 FAM186AA6NE01 2351 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 A8MWL6 223 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 SLC52A3Q9NQ40 469 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 MTFP1Q9UDX5 166 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 CDC42EP3Q9UKI2 254 aa9.96□□□□□ -0.82
PTPN4-201ENST00000263708 TMEM50BP56557 158 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 SRSF5Q13243 272 aaKnown RBP9.95□□□□□ -0.82
PTPN4-201ENST00000263708 PRR32B1ATL7 298 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 C9JCJ5 164 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 HBZP02008 142 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 CFAP161Q6P656 301 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 DOPEY2Q9Y3R5 2298 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 H3BQ15 152 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 EPHA8P29322 1005 aaPredicted RBP9.95□□□□□ -0.82
PTPN4-201ENST00000263708 FAM169BQ8N8A8 192 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 PPIAL4EA0A075B759 164 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 NKX2-6A6NCS4 301 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 PPIAL4DF5H284 164 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 PPIAL4FP0DN26 164 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 RCC2Q9P258 522 aaKnown RBP9.95□□□□□ -0.82
PTPN4-201ENST00000263708 PPIAL4AQ9Y536 164 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 HSPB9Q9BQS6 159 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 ATP5J2P56134 94 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 NUBPLQ8TB37 319 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 ITLN2Q8WWU7 325 aaPredicted RBP9.95□□□□□ -0.82
PTPN4-201ENST00000263708 SCNM1Q9BWG6 230 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 SIGLEC7Q9Y286 467 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 TMEM170BQ5T4T1 132 aa9.95□□□□□ -0.82
PTPN4-201ENST00000263708 MBD1Q9UIS9 605 aaPredicted RBP9.94□□□□□ -0.82
PTPN4-201ENST00000263708 F5P12259 2224 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 A0A1W2PRX2 142 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 FAM74A7A6NL05 159 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 REG1AP05451 166 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 NAT2P11245 290 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 IBA57Q5T440 356 aaKnown RBP9.94□□□□□ -0.82
PTPN4-201ENST00000263708 ZNF770Q6IQ21 691 aaPredicted RBP9.94□□□□□ -0.82
PTPN4-201ENST00000263708 OR2A4O95047 310 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 PPYP01298 95 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 CDKN2AP42771 156 aaKnown RBP9.94□□□□□ -0.82
PTPN4-201ENST00000263708 GZMKP49863 264 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 TNFSF10P50591 281 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 AMER3Q8N944 861 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 OR2A7Q96R45 310 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 DOCK10Q96BY6 2186 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 ANKRD36A6QL64 1941 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 TMEM210A6NLX4 147 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 GAPDHP04406 335 aaKnown RBP9.94□□□□□ -0.82
PTPN4-201ENST00000263708 PSG9Q00887 426 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 PRICKLE4Q2TBC4 344 aa9.94□□□□□ -0.82
PTPN4-201ENST00000263708 PRSS41Q7RTY9 318 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms