RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 IGLV3-21P80748 117 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 AAED1Q7RTV5 226 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 APH1AQ96BI3 265 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 FREM1Q5H8C1 2179 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 SLC22A20A6NK97 555 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 SERF1AO75920 110 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 ACTL6BO94805 426 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 EXT1Q16394 746 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 FAM58AQ8N1B3 248 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 OR1L6Q8NGR2 347 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 ST6GALNAC6Q969X2 333 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 SPSB1Q96BD6 273 aa13.66□□□□□ -0.22
PRPF40B-201ENST00000261897 A0A1B0GX78 115 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 SNURFLB1AK76 121 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 B4E171 279 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 TSPAN7P41732 249 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 MSMO1Q15800 293 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 CEACAM16Q2WEN9 425 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 GCSAMLQ5JQS6 135 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 MRPL54Q6P161 138 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 C7orf61Q8IZ16 206 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 FAM19A2Q8N3H0 131 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 ACY3Q96HD9 319 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 OR6C3Q9NZP0 311 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 NAPSAO96009 420 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 OTX1P32242 354 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 ATP5G3P48201 142 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 RELQ04864 619 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 ZNF726P1Q15940 193 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 LHFPL2Q6ZUX7 228 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 OR10P1Q8NGE3 313 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 TMEM170AQ8WVE7 144 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 ZCCHC14Q8WYQ9 949 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 TECTBQ96PL2 329 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 CELA2AP08217 269 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 HES3Q5TGS1 186 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 VHLLQ6RSH7 139 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 YPEL4Q96NS1 127 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 RAB40CQ96S21 281 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 CLCF1Q9UBD9 225 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 FBLN5Q9UBX5 448 aa13.65□□□□□ -0.22
PRPF40B-201ENST00000261897 ZIC3O60481 467 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 PGLYRP1O75594 196 aaPredicted RBP13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 COX5AP20674 150 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 TCTAP57738 103 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 SPATA45Q537H7 98 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 NUFIP2Q7Z417 695 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 RPP25LQ8N5L8 163 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 OR5L2Q8NGL0 311 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 ZNF596Q8TC21 504 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 TAF15Q92804 592 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 MRGPRX4Q96LA9 322 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 OR6C1Q96RD1 312 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 NUDT16L1Q9BRJ7 211 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 OR1A1Q9P1Q5 309 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 A0A1W2PQD3 144 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 C5orf49A4QMS7 147 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 F2RP25116 425 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 ADMP35318 185 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 G6PCP35575 357 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 SLC25A47Q6Q0C1 308 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 CYP2G1PQ6ZSU1 146 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 CD207Q9UJ71 328 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 PCDH15Q96QU1 1955 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 EYSQ5T1H1 3165 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 PRR19A6NJB7 356 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 M0QZK8 103 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 GGCTO75223 188 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 Q6ZRM9 215 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 OR1F12Q8NHA8 337 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 RFESDQ8TAC1 157 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 SSMEM1Q8WWF3 244 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 MTCH1Q9NZJ7 389 aa13.64□□□□□ -0.23
PRPF40B-201ENST00000261897 ZDBF2Q9HCK1 2354 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 AQP7P3A6NL99 342 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 DEFB108AA8MXU0 73 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 DUX1O43812 170 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 ZFAND5O76080 213 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 GNRH1P01148 92 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 HOXA6P31267 233 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 RBM11P57052 281 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 CLDN23Q96B33 292 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 BORCS7Q96B45 105 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 ANGPTL4Q9BY76 406 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 MRPL13Q9BYD1 178 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 MTCH2Q9Y6C9 303 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 KIR2DS1A0A191URI9 304 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 CXCL13O43927 109 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 ZNF253O75346 499 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 PFN1P07737 140 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 KIR2DS4P43632 304 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 KIR2DS1Q14954 304 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 PLXDC1Q8IUK5 500 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 POC1BQ8TC44 478 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 TFF3Q07654 80 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms