RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 TNFSF15O95150 251 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 LYZL4Q96KX0 146 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 GINS3Q9BRX5 216 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR2D2Q9H210 308 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ELOA3CA0A087WX78 387 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ST8SIA5O15466 376 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 APOA2P02652 100 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 PAX6P26367 422 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 MOB1BQ7L9L4 216 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 HSD17B10Q99714 261 aaKnown RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 FAM117AQ9C073 453 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM222Q9H0R3 208 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SH2D2AQ9NP31 389 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 CYTL1Q9NRR1 136 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 CEP192Q8TEP8 1941 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 C9JQL5 133 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 HAND1O96004 215 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 G6PCP35575 357 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 THBS3P49746 956 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TAAR9Q96RI9 348 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 CTDSP1Q9GZU7 261 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 C11orf94C9JXX5 98 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 PTBP3O95758 552 aaKnown RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ERVFC1-1P60608 527 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 RHOBP62745 196 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF826PQ6ZT77 177 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF441Q8N8Z8 693 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 EDARADDQ8WWZ3 215 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF524Q96C55 264 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 C10orf35Q96D05 121 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 FKBP11Q9NYL4 201 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR1A1Q9P1Q5 309 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 FBLN5Q9UBX5 448 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TCFL5Q9UL49 500 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SSUH2Q9Y2M2 353 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 LDLRAD4O15165 306 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 GATCO43716 136 aaKnown RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 BCL2P10415 239 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SELEP16581 610 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 MAGEA5P43359 124 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 CDC34P49427 236 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 GNG10P50151 68 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SOX8P57073 446 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 IQCJQ1A5X6 159 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SLC35E3Q7Z769 313 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 NFAM1Q8NET5 270 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ANGPTL4Q9BY76 406 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM9BQ9NQ34 198 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 M0R143 59 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SRP19P09132 144 aaKnown RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR2M7Q8NG81 312 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR2J1Q9GZK6 312 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF581Q9P0T4 197 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 GAMTQ14353 236 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 GDF9O60383 454 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 RNF224P0DH78 156 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 CCKARP32238 428 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 MPLP40238 635 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 FAM3BP58499 235 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SUPT4H1P63272 117 aaKnown RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 NUFIP2Q7Z417 695 aaKnown RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 PPP1R32Q7Z5V6 425 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 ABHD14BQ96IU4 210 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SMIM8Q96KF7 97 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 IL36RNQ9UBH0 155 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TLN2Q9Y4G6 2542 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1W2PQM1 296 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR5H1A6NKK0 313 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 M0R1B8 84 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 MT-CO3P00414 261 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 CLPSP04118 112 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 WFDC8Q8IUA0 241 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR5A2Q8NGI9 324 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 MRPL30Q8TCC3 161 aaKnown RBP3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TM2D1Q9BX74 207 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SIRT7Q9NRC8 400 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TUBD1Q9UJT1 453 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 PQLC2LA1A4F0 135 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 NPIPB13A6NJU9 1138 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 NPIPB4C9JG80 1138 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 EGR1P18146 543 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 PKIAP61925 76 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SLC35B1P78383 322 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 TPRX1Q8N7U7 411 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR2W1Q9Y3N9 320 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 NKX6-3A6NJ46 265 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 LTBRP36941 435 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SLC25A40Q8TBP6 338 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 OR51M1Q9H341 326 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 HS3ST3B1Q9Y662 390 aa3.97□□□□□ -1.77
VPS13C-201ENST00000249837 SERTM2A0A1B0GWG4 89 aa3.96□□□□□ -1.77
VPS13C-201ENST00000249837 QRFPP83859 136 aa3.96□□□□□ -1.77
VPS13C-201ENST00000249837 CISD2Q8N5K1 135 aaKnown RBP3.96□□□□□ -1.77
VPS13C-201ENST00000249837 OR10X1Q8NGY0 326 aa3.96□□□□□ -1.77
VPS13C-201ENST00000249837 LEAP2Q969E1 77 aa3.96□□□□□ -1.77
VPS13C-201ENST00000249837 B4DEV8 164 aa3.96□□□□□ -1.77
VPS13C-201ENST00000249837 TOX4O94842 621 aa3.96□□□□□ -1.77
VPS13C-201ENST00000249837 OR5G3P0C626 314 aa3.96□□□□□ -1.77
VPS13C-201ENST00000249837 RPS23P62266 143 aaKnown RBP3.96□□□□□ -1.77
VPS13C-201ENST00000249837 HIST1H3AP68431 136 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms