RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FHITP49789 147 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 CAV3P56539 151 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ACTR3P61158 418 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 UBA52P62987 128 aaKnown RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 APOFQ13790 326 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 MICBQ29980 383 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 FAM201AQ5SY85 155 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 PRAMEF6Q5VXH4 476 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMEM236Q5W0B7 351 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 LEMD1Q68G75 181 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 METAP1DQ6UB28 335 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 LYPD2Q6UXB3 125 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 WDR82Q6UXN9 313 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF826PQ6ZT77 177 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ASRGL1Q7L266 308 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 WDR86Q86TI4 376 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 EGFL6Q8IUX8 553 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 BPIFB2Q8N4F0 458 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNRF1Q8ND25 227 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 LY6G5BQ8NDX9 201 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 CCDC54Q8NEL0 328 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR1M1Q8NGA1 313 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR8B12Q8NGG6 310 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR5A2Q8NGI9 324 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR8S1Q8NH09 359 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 TRUB1Q8WWH5 349 aaKnown RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR5P3Q8WZ94 311 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZMYND19Q96E35 227 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 CENPNQ96H22 339 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 TECTBQ96PL2 329 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 MICU1Q9BPX6 476 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 RTL8AQ9BWD3 113 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 GABARAPL3Q9BY60 117 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 MROQ9BYG7 248 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ESM1Q9NQ30 184 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 UFSP2Q9NUQ7 469 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 PRR34Q9NV39 138 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 C1orf123Q9NWV4 160 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 FAM206AQ9NX38 181 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 TVP23BQ9NYZ1 205 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 DNAJC27Q9NZQ0 273 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF581Q9P0T4 197 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 NUFIP1Q9UHK0 495 aaKnown RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 LAMP5Q9UJQ1 280 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 KLHDC2Q9Y2U9 406 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 RHBDD3Q9Y3P4 386 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 AP4S1Q9Y587 144 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 TRAV40A0A0B4J280 105 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 CENPVL3A0A0U1RRI6 287 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF816-ZNF321PA0A0X1KG74 233 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 A0A1B0GTI1 187 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 A0A1B0GUS0 222 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMEM269A0A1B0GVZ9 245 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 A4D1N5 150 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF670-ZNF695F2Z2N8 137 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC33A1O00400 549 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 DLGAP1O14490 977 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 CCSO14618 274 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 PHOX2AO14813 284 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 PRKYO43930 277 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 NOS1APO75052 506 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 FCN3O75636 299 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 SULT1C4O75897 302 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 DHRS3O75911 302 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 TTRP02766 147 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 HCKP08631 526 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 CCL1P22362 96 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 HTR1FP30939 366 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 RBMXP38159 391 aaKnown RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 HCCSP53701 268 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 GNG3P63215 75 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 RIPPLY1Q0D2K3 151 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 PRDX4Q13162 271 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF829Q3KNS6 432 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 CEACAM21Q3KPI0 293 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF506Q5JVG8 444 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF684Q5T5D7 378 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 GPR157Q5UAW9 335 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 C1orf146Q5VVC0 180 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMEM42Q69YG0 159 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 STUMQ69YW2 141 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZFP1Q6P2D0 407 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 C11orf88Q6PI97 169 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF322Q6U7Q0 402 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 C12orf54Q6X4T0 127 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC36A1Q7Z2H8 476 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 GID4Q8IVV7 300 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 C10orf67Q8IYJ2 551 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ELMOD2Q8IZ81 293 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMEM86BQ8N661 226 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 KIR3DL3Q8N743 410 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 SIGLECL1Q8N7X8 197 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 BBS1Q8NFJ9 593 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR8J1Q8NGP2 316 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR2T27Q8NH04 317 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ANGPTL6Q8NI99 470 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 TYMSOSQ8TAI1 123 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF671Q8TAW3 534 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 LRRC29Q8WV35 223 aa2.73□□□□□ -1.97
CKS1BP3-201ENST00000600888 C10orf35Q96D05 121 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms