RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CT45A3Q8NHU0 189 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 GHSRQ92847 366 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 OR14A2Q96R54 314 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 GNB4Q9HAV0 340 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 SPACA1Q9HBV2 294 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 S100A14Q9HCY8 104 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 OR2S2Q9NQN1 319 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 CHCHD3Q9NX63 227 aaKnown RBP10.71□□□□□ -0.69
HDAC5-208ENST00000588419 CLEC2DQ9UHP7 191 aa10.71□□□□□ -0.69
HDAC5-208ENST00000588419 EXOSC1Q9Y3B2 195 aaKnown RBP10.71□□□□□ -0.69
HDAC5-208ENST00000588419 IRGMA1A4Y4 181 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 G3V318 75 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 ATP6V0E1O15342 81 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 IGHG4P01861 327 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 OR5H8P0DN80 308 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 CNTFRP26992 372 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 CFHR3Q02985 330 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 MED21Q13503 144 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 ECSCRQ19T08 205 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 Q499Y3 187 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 NKAPLQ5M9Q1 402 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 TRAT1Q6PIZ9 186 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 PQLC1Q8N2U9 271 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 OR52L2PQ8NGH6 319 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 CYGBQ8WWM9 190 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 FAM46BQ96A09 425 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 ZNF251Q9BRH9 671 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 ABHD14AQ9BUJ0 271 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 MRPL20Q9BYC9 149 aaKnown RBP10.7□□□□□ -0.7
HDAC5-208ENST00000588419 TAF9BQ9HBM6 251 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 BABAM2Q9NXR7 383 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
HDAC5-208ENST00000588419 KCNIP1Q9NZI2 227 aa10.7□□□□□ -0.7
HDAC5-208ENST00000588419 RCC2Q9P258 522 aaKnown RBP10.7□□□□□ -0.7
HDAC5-208ENST00000588419 ZNF256Q9Y2P7 627 aaPredicted RBP10.7□□□□□ -0.7
HDAC5-208ENST00000588419 LSM4Q9Y4Z0 139 aaKnown RBP10.7□□□□□ -0.7
HDAC5-208ENST00000588419 SORL1Q92673 2214 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 TRBV5-5A0A0J9YX44 114 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 OGG1O15527 345 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 MGMTP16455 207 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 FSTP19883 344 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 PSMB8P28062 276 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 PPP1CCP36873 323 aaKnown RBP10.69□□□□□ -0.7
HDAC5-208ENST00000588419 ACTBP60709 375 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 TMEM30BQ3MIR4 351 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 Q3ZCU0 254 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 YIF1BQ5BJH7 314 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 ABHD5Q8WTS1 349 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 ISYNA1Q9NPH2 558 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 SCOCQ9UIL1 159 aa10.69□□□□□ -0.7
HDAC5-208ENST00000588419 DIMT1Q9UNQ2 313 aaKnown RBP10.69□□□□□ -0.7
HDAC5-208ENST00000588419 LANCL1O43813 399 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 OR8U8P0C7N1 319 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 ZNF137PP52743 207 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 GNB1P62873 340 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 GABPB1Q06547 395 aaPredicted RBP10.68□□□□□ -0.7
HDAC5-208ENST00000588419 ZNF616Q08AN1 781 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 FHL3Q13643 280 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 LRRC36Q1X8D7 754 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 DMKNQ6E0U4 476 aaPredicted RBP10.68□□□□□ -0.7
HDAC5-208ENST00000588419 C10orf67Q8IYJ2 551 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 RNF152Q8N8N0 203 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 OR1N2Q8NGR9 330 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 TMEM80Q96HE8 168 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 PGLYRP3Q96LB9 341 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 ALX4Q9H161 411 aaPredicted RBP10.68□□□□□ -0.7
HDAC5-208ENST00000588419 KLK15Q9H2R5 256 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 KIAA1456Q9P272 454 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 A3GALT2U3KPV4 340 aa10.68□□□□□ -0.7
HDAC5-208ENST00000588419 TRAV41A0A0B4J266 112 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 A0A1W2PN81 502 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 NBR2O15453 112 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 SAP30O75446 220 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 IGF1P05019 195 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 BLVRBP30043 206 aaPredicted RBP10.67□□□□□ -0.7
HDAC5-208ENST00000588419 CHRNA7P36544 502 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 CAPGP40121 348 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 OR3A3P47888 321 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 RPS11P62280 158 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDAC5-208ENST00000588419 PLGLAQ15195 96 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 MORN2Q502X0 79 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 SETD6Q8TBK2 473 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 CASTOR1Q8WTX7 329 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 MRPS24Q96EL2 167 aaKnown RBP10.67□□□□□ -0.7
HDAC5-208ENST00000588419 RITA1Q96K30 269 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 ANKRD60Q9BZ19 345 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 OR51J1Q9H342 316 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 JPT1Q9UK76 154 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
HDAC5-208ENST00000588419 SAA2-SAA4A0A096LPE2 208 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 IGHV7-81A0A0B4J1V7 117 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 MYL12BO14950 172 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 PDCD6O75340 191 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 SAA2P0DJI9 122 aaPredicted RBP10.66□□□□□ -0.7
HDAC5-208ENST00000588419 FUT3P21217 361 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 SLURP1P55000 103 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 FAM27D1Q5T7N8 215 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 ASPHD1Q5U4P2 390 aa10.66□□□□□ -0.7
HDAC5-208ENST00000588419 OVCH2Q7RTZ1 564 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms