RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 PAM16Q9Y3D7 125 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 THADAQ6YHU6 1953 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 LRRC3CA6NJW4 275 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 OPN1MWP04001 364 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 OPN1MW2P0DN77 364 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 OPN1MW3P0DN78 364 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 CEBPDP49716 269 aaPredicted RBP9.09□□□□□ -0.95
RNF43-207ENST00000583753 RAC1P63000 192 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 SLC35B1P78383 322 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 HTD2P86397 168 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 COL10A1Q03692 680 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 FAM27BQ5VT28 67 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 OR2T10Q8NGZ9 312 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 FAM131CQ96AQ9 280 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 MS4A10Q96PG2 267 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 RNF122Q9H9V4 155 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 DCAF16Q9NXF7 216 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 GRIFINA4D1Z8 144 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 PGLYRP1O75594 196 aaPredicted RBP9.09□□□□□ -0.95
RNF43-207ENST00000583753 ACTL6BO94805 426 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 HSPB1P04792 205 aaKnown RBP9.09□□□□□ -0.95
RNF43-207ENST00000583753 F2RP25116 425 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 KRTDAPP60985 99 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 ZNF90Q03938 601 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 P2RY6Q15077 328 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 ABHD17BQ5VST6 288 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 CNEP1R1Q8N9A8 125 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 OIT3Q8WWZ8 545 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 MISP3Q96FF7 219 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 GALNT14Q96FL9 552 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 TAAR9Q96RI9 348 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 TM2D1Q9BX74 207 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 CDH20Q9HBT6 801 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 GNG12Q9UBI6 72 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
RNF43-207ENST00000583753 A0A0G2JMM0 328 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 A0A1W2PPB8 328 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 A0A1W2PRS3 328 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 ARGFXA6NJG6 315 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 KIR3DP1A8MWS1 328 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 RPL36A-HNRNPH2H7BZ11 118 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 KITLGP21583 273 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 CYB561P49447 251 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 MSMO1Q15800 293 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 TMEM211Q6ICI0 200 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 TUSC5Q8IXB3 177 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 ZNF441Q8N8Z8 693 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 OR2V1Q8NHB1 315 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 CLDND2Q8NHS1 167 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 NUDT16L1Q9BRJ7 211 aaKnown RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 FBLN5Q9UBX5 448 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 PITPNC1Q9UKF7 332 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 ELOA3CA0A087WX78 387 aaPredicted RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 PGPEP1LA6NFU8 196 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 TMEM50AO95807 157 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 CYB5R3P00387 301 aaPredicted RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 RFPL3SP0C7P2 107 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 LIFP15018 202 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 HIST1H1BP16401 226 aaKnown RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 HOXC12P31275 282 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 FAM58AQ8N1B3 248 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 C14orf144Q96I85 54 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 C18orf12Q96KH6 178 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 DEFB127Q9H1M4 99 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 RYDENQ9NUL5 291 aaKnown RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 IGHV5-10-1A0A0J9YXX1 117 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 A0A1W2PR77 199 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 KIAA1324LA8MWY0 1029 aaPredicted RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 AQP7O14520 342 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 CDIPTO14735 213 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 SELLP14151 372 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 OR3A1P47881 315 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 UBE2NP61088 152 aaKnown RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 ALKBH6Q3KRA9 238 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 OR4X1Q8NH49 305 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 RHBDD1Q8TEB9 315 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 RAB40CQ96S21 281 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
RNF43-207ENST00000583753 SIRT7Q9NRC8 400 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 MED13LQ71F56 2210 aa9.08□□□□□ -0.96
RNF43-207ENST00000583753 A0A1W2PQM1 296 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 IFNL4K9M1U5 179 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 ZIC3O60481 467 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 TCL1AP56279 114 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 RAC3P60763 192 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 HIST1H3AP68431 136 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 NFAM1Q8NET5 270 aaPredicted RBP9.07□□□□□ -0.96
RNF43-207ENST00000583753 APH1AQ96BI3 265 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 BTF3L4Q96K17 158 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 ANGPTL4Q9BY76 406 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 OR2D2Q9H210 308 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 GPR35Q9HC97 309 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 PARD6AQ9NPB6 346 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
RNF43-207ENST00000583753 CELSR3Q9NYQ7 3312 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms