RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 FOXJ2Q9P0K8 574 aa11.97□□□□□ -0.49
RABGGTA-220ENST00000560998 A0A1W2PNU3 283 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 DUXBA0A1W2PPF3 345 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 M0R135 149 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 TRAPPC6AO75865 159 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 TNFSF13O75888 250 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 CD59P13987 128 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 IRF2P14316 349 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 ASCL1P50553 236 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 DYNLT3P51808 116 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 CNN1P51911 297 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 ELLP55199 621 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 CRIP3Q6Q6R5 217 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 OR10D3Q8NH80 312 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 SPTSSAQ969W0 71 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 ZNF799Q96GE5 643 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 REEP6Q96HR9 211 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 DIRC2Q96SL1 478 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 GLRX2Q9NS18 164 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 PLEK2Q9NYT0 353 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 RFNGQ9Y644 331 aa11.96□□□□□ -0.49
RABGGTA-220ENST00000560998 A0A1W2PPQ1 181 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 MAP1LC3B2A6NCE7 125 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 MSTNO14793 375 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 GDF1P27539 372 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 CLDN15P56746 228 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 UBE2NP61088 152 aaKnown RBP11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 KISS1Q15726 138 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 PLA2G2CQ5R387 149 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 CDCP2Q5VXM1 449 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 C22orf15Q8WYQ4 148 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 ZCCHC14Q8WYQ9 949 aaKnown RBP11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 LOXL4Q96JB6 756 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 WFIKKN1Q96NZ8 548 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 MAP1LC3BQ9GZQ8 125 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 PLK3Q9H4B4 646 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM38BQ9NVV0 291 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 PLEKHJ1Q9NW61 149 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 OR6C3Q9NZP0 311 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 PRSS50Q9UI38 385 aa11.96□□□□□ -0.5
RABGGTA-220ENST00000560998 FAM221AA4D161 298 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF850A8MQ14 1090 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 PROB1E7EW31 1015 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 PHF1O43189 567 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 SIAH2O43255 324 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 LCATP04180 440 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 FAHP16930 419 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 CRYGSP22914 178 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 LCN2P80188 198 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 TMEM183BQ1AE95 376 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 BSXQ3C1V8 233 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 OR5L1Q8NGL2 311 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 CPT1CQ8TCG5 803 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 PP6455Q8WZ26 134 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 MOB3AQ96BX8 217 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 OR2J1Q9GZK6 312 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 RTTNQ86VV8 2226 aa11.95□□□□□ -0.5
RABGGTA-220ENST00000560998 CLEC18AA5D8T8 446 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 ZFP92A6NM28 416 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 SYNGR3O43761 229 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 KBTBD11O94819 623 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 IFNA5P01569 189 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 TUBG1P23258 451 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 GFRA1P56159 465 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 ZNF92Q03936 586 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 ADIRFQ15847 76 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 SNAI3Q3KNW1 292 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 DMRTC1Q5HYR2 192 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 IL22RA1Q8N6P7 574 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 CLEC18CQ8NCF0 446 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 C10orf35Q96D05 121 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 OR51I2Q9H344 312 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 LIME1Q9H400 295 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 GPR35Q9HC97 309 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 FUT9Q9Y231 359 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 PIGLQ9Y2B2 252 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 ATXN7O15265 892 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 SSSCA1O60232 199 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 GZMHP20718 246 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 ERVS71-1P61550 626 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 RSPO4Q2I0M5 234 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 SPINK14Q6IE38 97 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 KCNIP4Q6PIL6 250 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 NUFIP2Q7Z417 695 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 OR5D18Q8NGL1 313 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 OR2T10Q8NGZ9 312 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 CYYR1Q96J86 154 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 MS4A10Q96PG2 267 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 SMIM7Q9BQ49 75 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 PSMG3Q9BT73 122 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 BOKQ9UMX3 212 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 GPR179Q6PRD1 2367 aa11.94□□□□□ -0.5
RABGGTA-220ENST00000560998 MUC3AQ02505 3323 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 WDFY4Q6ZS81 3184 aa11.93□□□□□ -0.5
RABGGTA-220ENST00000560998 NKX2-6A6NCS4 301 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms