RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ATF4P18848 351 aaPredicted RBP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 GCH1P30793 250 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 SNCAP37840 140 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 MPV17P39210 176 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 CAMLGP49069 296 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 NOVA1P51513 510 aaKnown RBP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 TAS2R30P59541 319 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 ERVS71-1P61550 626 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 POLR2GP62487 172 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 RPL23AP62750 156 aaKnown RBP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 NHLH2Q02577 135 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 SRSF6Q13247 344 aaKnown RBP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 PEA15Q15121 130 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 TESK1Q15569 626 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 DEFB109BQ30KR1 87 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 ALKBH6Q3KRA9 238 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 VWA1Q6PCB0 445 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 TRAT1Q6PIZ9 186 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 DPPA3Q6W0C5 159 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 ACP7Q6ZNF0 438 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 BOLLQ8N9W6 283 aaKnown RBP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 OR10Z1Q8NGY1 313 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 GPR146Q96CH1 333 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 ZNF71Q9NQZ8 489 aaPredicted RBP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 C19orf12Q9NSK7 152 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 OR1A1Q9P1Q5 309 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 NDRG3Q9UGV2 375 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 CELSR3Q9NYQ7 3312 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 ARID1AO14497 2285 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 ATRXP46100 2492 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 KIAA2026Q5HYC2 2103 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 FASNP49327 2511 aaKnown RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 OR5H1A6NKK0 313 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 FAM157AC9JC47 383 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 H0YL77 283 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 TOR1AO14656 332 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 TIMM8AO60220 97 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 SSSCA1O60232 199 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 TNFSF13O75888 250 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 DFFBO76075 338 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 PTBP3O95758 552 aaKnown RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 GRPP07492 148 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 SFTA3P0C7M3 94 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 OR8U9P0C7N5 309 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 CFHR2P36980 270 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 AKR1C2P52895 323 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 SRSF3P84103 164 aaKnown RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 AKR1C1Q04828 323 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 GUCA2BQ16661 112 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 SMIM21Q3B7S5 101 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 CXorf66Q5JRM2 361 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 FAM122CQ6P4D5 195 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 BHLHA15Q7RTS1 189 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 C5orf24Q7Z6I8 188 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 CXorf67Q86X51 503 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 C11orf53Q8IXP5 236 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 ZNF645Q8N7E2 425 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 OR8U1Q8NH10 309 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 STARD4Q96DR4 205 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 LURAP1Q96LR2 239 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 PBDC1Q9BVG4 233 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 PARD6GQ9BYG4 376 aaPredicted RBP6.82□□□□□ -1.32
SMAD3-212ENST00000559937 COA4Q9NYJ1 87 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 DKK4Q9UBT3 224 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 RNF115Q9Y4L5 304 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 SLC25A15Q9Y619 301 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 WSB1Q9Y6I7 421 aa6.82□□□□□ -1.32
SMAD3-212ENST00000559937 WDFY3Q8IZQ1 3526 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 TANC2Q9HCD6 1990 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 IGHV1-18A0A0C4DH31 117 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 A0A0G2JRQ6 117 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 FAM74A7A6NL05 159 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 KIAA1324LA8MWY0 1029 aaPredicted RBP6.81□□□□□ -1.32
SMAD3-212ENST00000559937 TXNL1O43396 289 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 CHST1O43916 411 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 AGFG2O95081 481 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 CRYABP02511 175 aaKnown RBP6.81□□□□□ -1.32
SMAD3-212ENST00000559937 OR8U8P0C7N1 319 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 PSG2P11465 335 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 ATP6V0CP27449 155 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 CD80P33681 288 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 SULT1A1P50225 295 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 DYNLT3P51808 116 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 PAX9P55771 341 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 ZNF616Q08AN1 781 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 CATR1Q13166 79 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 IGFBP7Q16270 282 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 GUK1Q16774 197 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 MIDNQ504T8 468 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 WDR82Q6UXN9 313 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 Q6ZS92 163 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 STX12Q86Y82 276 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 ODF3L1Q8IXM7 274 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 ZNF610Q8N9Z0 462 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 HSD17B11Q8NBQ5 300 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 OR51H1Q8NH63 302 aa6.81□□□□□ -1.32
SMAD3-212ENST00000559937 RNASE11Q8TAA1 199 aaKnown RBP6.81□□□□□ -1.32
SMAD3-212ENST00000559937 IL1F10Q8WWZ1 152 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms