RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 GAFA1Q96PS6 74 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 NMES1Q9C002 83 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 RAB1BQ9H0U4 201 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 CBLN4Q9NTU7 201 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 RDH8Q9NYR8 311 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 OR1A1Q9P1Q5 309 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 RBM7Q9Y580 266 aaKnown RBP11.5□□□□□ -0.57
TPM1-215ENST00000558868 MAB21L2Q9Y586 359 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 DYSFO75923 2080 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 C3orf85A0A1B0GTC6 90 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 HMSDA8MTL9 139 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 GYPAP02724 150 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 EDDM3BP56851 147 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 TMEM187Q14656 261 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 MSMO1Q15800 293 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 TMEM30BQ3MIR4 351 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 FAM201AQ5SY85 155 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 LIAT1Q6ZQX7 453 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 C5orf24Q7Z6I8 188 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 LDLRAD3Q86YD5 345 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 ZNRF1Q8ND25 227 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 BVESQ8NE79 360 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 OR13A1Q8NGR1 328 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 OR1L1Q8NH94 360 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 CCL13Q99616 98 aa11.49□□□□□ -0.57
TPM1-215ENST00000558868 TRGV10A0A0A0MS01 117 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 C13orf42A0A1B0GVH6 325 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 RNF212BA8MTL3 300 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 CCSO14618 274 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 HSD17B6O14756 317 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 PHF1O43189 567 aaPredicted RBP11.48□□□□□ -0.57
TPM1-215ENST00000558868 FSTL3O95633 263 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 WNT2P09544 360 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 OR5AC1P0C628 307 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 ZNF818PQ6ZRF7 136 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 TBC1D26Q86UD7 250 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 C9orf62Q8N4C0 152 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 EDARADDQ8WWZ3 215 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 C2orf50Q96LR7 162 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 CCL28Q9NRJ3 127 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 JPT1Q9UK76 154 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 UBE2J1Q9Y385 318 aaPredicted RBP11.48□□□□□ -0.57
TPM1-215ENST00000558868 HSPB11Q9Y547 144 aa11.48□□□□□ -0.57
TPM1-215ENST00000558868 DIDO1Q9BTC0 2240 aaKnown RBP11.48□□□□□ -0.57
TPM1-215ENST00000558868 DUXBA0A1W2PPF3 345 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 G3V3Q6 166 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 C15orf65H3BRN8 121 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 SLC25A4P12235 298 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
TPM1-215ENST00000558868 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 OR11H4Q8NGC9 324 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 THAP6Q8TBB0 222 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 NEU4Q8WWR8 484 aaPredicted RBP11.47□□□□□ -0.57
TPM1-215ENST00000558868 CORO2AQ92828 525 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 GON7Q9BXV9 100 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 TMEM222Q9H0R3 208 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 SLA2Q9H6Q3 261 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 OR2S2Q9NQN1 319 aa11.47□□□□□ -0.57
TPM1-215ENST00000558868 hADV38S2A0JD32 116 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 H0Y980 276 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 F2RL2O00254 374 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 TMPRSS2O15393 492 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 NDUFB3O43676 98 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 PGLYRP1O75594 196 aaPredicted RBP11.46□□□□□ -0.57
TPM1-215ENST00000558868 ADAP1O75689 374 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 HOXB5P09067 269 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 OR8U9P0C7N5 309 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 IGFBP2P18065 325 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.57
TPM1-215ENST00000558868 SP6Q3SY56 376 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 ESCO2Q56NI9 601 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 LRRC10Q5BKY1 277 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 LAMTOR1Q6IAA8 161 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 TMEM65Q6PI78 240 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 DTX2Q86UW9 622 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 ZNF645Q8N7E2 425 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 OR52L2PQ8NGH6 319 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 OR8U1Q8NH10 309 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 GLYATL2Q8WU03 294 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 IL22RA2Q969J5 263 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 SEC22AQ96IW7 307 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 TMEM246Q9BRR3 403 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 DCAF16Q9NXF7 216 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 CALYQ9NYX4 217 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 KAAG1Q9UBP8 84 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 SLC25A10Q9UBX3 287 aaPredicted RBP11.46□□□□□ -0.57
TPM1-215ENST00000558868 KCNS2Q9ULS6 477 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 TMED3Q9Y3Q3 217 aa11.46□□□□□ -0.57
TPM1-215ENST00000558868 ICE1Q9Y2F5 2266 aa11.46□□□□□ -0.58
TPM1-215ENST00000558868 TANC2Q9HCD6 1990 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 ANKHD1Q8IWZ3 2542 aaKnown RBP11.45□□□□□ -0.58
TPM1-215ENST00000558868 FXYD6-FXYD2A0A087WZ82 144 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 KBTBD11-OT1A0A1B0GTJ5 212 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 ZNF729A6NN14 1252 aaPredicted RBP11.45□□□□□ -0.58
TPM1-215ENST00000558868 L7N2F9 121 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms