RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SOCS1O15524 211 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 PF4V1P10720 104 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 CHATP28329 748 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 BLVRBP30043 206 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-208ENST00000558827 RPS27AP62979 156 aaKnown RBP9.92□□□□□ -0.82
SMAD3-208ENST00000558827 FABP5Q01469 135 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 TPBGQ13641 420 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 SLC16A12Q6ZSM3 486 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 C18orf65Q6ZTR6 163 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 LINC00311Q8N616 119 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 C5orf56Q8N8D9 126 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 ZNF439Q8NDP4 499 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 OR52M1Q8NGK5 317 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 RTN4IP1Q8WWV3 396 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-208ENST00000558827 PHYHIPQ92561 330 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 THRSPQ92748 146 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 MGLLQ99685 303 aa9.92□□□□□ -0.82
SMAD3-208ENST00000558827 HDHD3Q9BSH5 251 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-208ENST00000558827 CHMP1AQ9HD42 196 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-208ENST00000558827 PSMB11A5LHX3 300 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A10PA6NDY2 464 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A7PA6NKC0 464 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A23PA8MXZ1 464 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
SMAD3-208ENST00000558827 SC5DO75845 299 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 UBBP0CG47 229 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 IL3RAP26951 378 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
SMAD3-208ENST00000558827 OR3A3P47888 321 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 QRFPP83859 136 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 ZNF816Q0VGE8 651 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-208ENST00000558827 PLA2G7Q13093 441 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 BEAN1Q3B7T3 259 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 MORN2Q502X0 79 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 HES5Q5TA89 166 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 Q6ZPA2 131 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 LCNL1Q6ZST4 164 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 SLC25A48Q6ZT89 311 aaKnown RBP9.91□□□□□ -0.82
SMAD3-208ENST00000558827 TGIF2LXQ8IUE1 241 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 OR4F17Q8NGA8 305 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 ST6GALNAC6Q969X2 333 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 OR4F4Q96R69 305 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 VCX3BQ9H321 246 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 GHRLQ9UBU3 117 aa9.91□□□□□ -0.82
SMAD3-208ENST00000558827 SMIM30A4D0T7 59 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 TMEM14DPA8MWL7 114 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 M0QZK8 103 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 SLC22A1O15245 554 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 IGLL1P15814 213 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 CPEP16870 476 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 VEGFCP49767 419 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 F2RL1P55085 397 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 MLLT11Q13015 90 aaPredicted RBP9.9□□□□□ -0.82
SMAD3-208ENST00000558827 RAB11BQ15907 218 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 PRSS48Q7RTY5 328 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 SLC35E3Q7Z769 313 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 GAPTQ8N292 157 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 OR51D1Q8NGF3 324 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 OR2T10Q8NGZ9 312 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 KCNG3Q8TAE7 436 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 RITA1Q96K30 269 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 PARP12Q9H0J9 701 aaKnown RBP9.9□□□□□ -0.82
SMAD3-208ENST00000558827 LPAR5Q9H1C0 372 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 PLEKHJ1Q9NW61 149 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 AK3Q9UIJ7 227 aa9.9□□□□□ -0.82
SMAD3-208ENST00000558827 ST8SIA5O15466 376 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 ATP6V1G2O95670 118 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 BPNT1O95861 308 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 PF4P02776 101 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 GLAP06280 429 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 SLC2A2P11168 524 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-208ENST00000558827 ARSBP15848 533 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 CD33P20138 364 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 CNTFRP26992 372 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 OR10A3P58181 314 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 SSX1Q16384 188 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 C2orf76Q3KRA6 126 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 Q8N9W7 124 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 OR6M1Q8NGM8 313 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 DUX3Q96PT4 197 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 MRPL20Q9BYC9 149 aaKnown RBP9.89□□□□□ -0.83
SMAD3-208ENST00000558827 PLSCR3Q9NRY6 295 aa9.89□□□□□ -0.83
SMAD3-208ENST00000558827 MBNL3Q9NUK0 354 aaKnown RBP9.89□□□□□ -0.83
SMAD3-208ENST00000558827 TSSC4Q9Y5U2 329 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-208ENST00000558827 A0A0B4J203 849 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 SHISA3A0PJX4 238 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 SLC17A2O00624 439 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 CA11O75493 328 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 MOSP00540 346 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 CD1BP29016 333 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 EBI3Q14213 229 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 TRAT1Q6PIZ9 186 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 ODF3L1Q8IXM7 274 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 Q8N6K4 173 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 C8orf31Q8N9H6 132 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 GALMQ96C23 342 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 ARHGAP5-AS1Q96IT6 56 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms