RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 OR14A2Q96R54 314 aa8.99□□□□□ -0.97
PRPF40B-212ENST00000551111 ETAA1Q9NY74 926 aa8.99□□□□□ -0.97
PRPF40B-212ENST00000551111 GNG12Q9UBI6 72 aa8.99□□□□□ -0.97
PRPF40B-212ENST00000551111 ZNF107Q9UII5 783 aaPredicted RBP8.99□□□□□ -0.97
PRPF40B-212ENST00000551111 TRAPPC2LQ9UL33 140 aa8.99□□□□□ -0.97
PRPF40B-212ENST00000551111 MRPS28Q9Y2Q9 187 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-212ENST00000551111 PEX16Q9Y5Y5 336 aa8.99□□□□□ -0.97
PRPF40B-212ENST00000551111 RAMP3O60896 148 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 GPX5O75715 221 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 MAS1P04201 325 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 DCKP27707 260 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 PPIFP30405 207 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 PPP1CCP36873 323 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 OR3A3P47888 321 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 GNB1P62873 340 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 LSAMPQ13449 338 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 ZNF260Q3ZCT1 412 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 MORN2Q502X0 79 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 C9orf66Q5T8R8 295 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 LAIR2Q6ISS4 152 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 LINC00596Q86U02 117 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 JAGN1Q8N5M9 183 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 CASTOR1Q8WTX7 329 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 C4orf3Q8WVX3 66 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 S100A13Q99584 98 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 MRPL20Q9BYC9 149 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 SELENOIQ9C0D9 397 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 ALX4Q9H161 411 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 TAF9BQ9HBM6 251 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 FBXO7Q9Y3I1 522 aa8.98□□□□□ -0.97
PRPF40B-212ENST00000551111 RYR2Q92736 4967 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 TNCP24821 2201 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 MCRIP1C9JLW8 97 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 I3L521 148 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 ATP6V0E1O15342 81 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 SC5DO75845 299 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 IGF1P05019 195 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 VDAC1P21796 283 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 IL3RAP26951 378 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 NDPQ00604 133 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 INSL4Q14641 139 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 Q499Y3 187 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 OR10K2Q6IF99 312 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 TMPRSS11AQ6ZMR5 421 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 ZNF491Q8N8L2 437 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 MRPL30Q8TCC3 161 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 GGHQ92820 318 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 FAM46BQ96A09 425 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 RDH12Q96NR8 316 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 MYCBPQ99417 103 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 NABP2Q9BQ15 211 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 ANKRD60Q9BZ19 345 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 OR2S2Q9NQN1 319 aa8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 PAK1IP1Q9NWT1 392 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 GAR1Q9NY12 217 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 DIMT1Q9UNQ2 313 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-212ENST00000551111 IGHV7-81A0A0B4J1V7 117 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 SPINT2O43291 252 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 LANCL1O43813 399 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 SOX15O60248 233 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 ZNF780AO75290 641 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 CRTAPO75718 401 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 BAG2O95816 211 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 NHLRC4P0CG21 123 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 MGMTP16455 207 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 FSTP19883 344 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 GP2P55259 537 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 ACTBP60709 375 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 MMDQ15546 238 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 LRRC36Q1X8D7 754 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 Q3ZCU0 254 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 AWAT2Q6E213 333 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 STX19Q8N4C7 294 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 Q96M66 194 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 DERL3Q96Q80 235 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 GON7Q9BXV9 100 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 PARP12Q9H0J9 701 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 KCNK15Q9H427 330 aa8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 MBNL3Q9NUK0 354 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 SMPD3Q9NY59 655 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-212ENST00000551111 FAM90A10PA6NDY2 464 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 FCN1O00602 326 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 RRP9O43818 475 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 IGLV1-40P01703 118 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 FUT3P21217 361 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 BLVRBP30043 206 aaPredicted RBP8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 SLURP1P55000 103 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 ST3GAL4Q11206 333 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 YIF1BQ5BJH7 314 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 C6orf141Q5SZD1 244 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 C6orf183Q5T699 404 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 FAM27D1Q5T7N8 215 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 SBSPONQ8IVN8 264 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 OR8H1Q8NGG4 311 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 OR1N2Q8NGR9 330 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 CYGBQ8WWM9 190 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 DCUN1D4Q92564 292 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 TMEM80Q96HE8 168 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 SULT4A1Q9BR01 284 aa8.95□□□□□ -0.98
PRPF40B-212ENST00000551111 OR51J1Q9H342 316 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms