RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 C19orf12Q9NSK7 152 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 MED19A0JLT2 244 aaPredicted RBP15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 AHRRA9YTQ3 701 aa15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 CST7O76096 145 aa15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 TMEM182Q6ZP80 229 aaPredicted RBP15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 Q6ZRM9 215 aa15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 OR5C1Q8NGR4 320 aa15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 STARD4Q96DR4 205 aa15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 DIDO1Q9BTC0 2240 aaKnown RBP15.62■□□□□ 0.09
PRPF40B-208ENST00000548436 CGAP01215 116 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 PRH1P02810 166 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 MMP9P14780 707 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 CEACAM6P40199 344 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 FABP6P51161 128 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 DYNLT3P51808 116 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF266Q14584 549 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 PRAMEF6Q5VXH4 476 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 SEM1Q6ZVN7 128 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 CXXC4Q9H2H0 198 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF71Q9NQZ8 489 aaPredicted RBP15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 BOD1L1Q8NFC6 3051 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 CACNA1DQ01668 2161 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF891A8MT65 544 aaPredicted RBP15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 KIAA1324LA8MWY0 1029 aaPredicted RBP15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 IGLV1-44P01699 117 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 TFF1P04155 84 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 LMO1P25800 156 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 ATP6V0CP27449 155 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 RAB5CP51148 216 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 DHRS7BQ6IAN0 325 aaPredicted RBP15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF295-AS1Q8N0V1 137 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 AKR1E2Q96JD6 320 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 MSL2Q9HCI7 577 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 KCNS2Q9ULS6 477 aa15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 STRAPQ9Y3F4 350 aaKnown RBP15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 RBM7Q9Y580 266 aaKnown RBP15.61■□□□□ 0.09
PRPF40B-208ENST00000548436 IGHV1-18A0A0C4DH31 117 aa15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 A0A1B0GU03 582 aa15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 K7N7A8 449 aa15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 WRBO00258 174 aa15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 TIMM8AO60220 97 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 KITLGP21583 273 aa15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 FIP1L1Q6UN15 594 aaKnown RBP15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 TMEM217Q8N7C4 229 aa15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 LAMA5O15230 3695 aa15.6■□□□□ 0.09
PRPF40B-208ENST00000548436 IGHV2OR16-5A0A0B4J2B6 119 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 SLC25A6P12236 298 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF585BQ52M93 769 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 WDR82Q6UXN9 313 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 UFSP2Q9NUQ7 469 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 PROCRQ9UNN8 238 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 A6NLC8 198 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 IGKV1-5P01602 117 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF16P17020 682 aaPredicted RBP15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 NFYBP25208 207 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 ACP7Q6ZNF0 438 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 ZADH2Q8N4Q0 377 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 COMMD1Q8N668 190 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 DRAM1Q8N682 238 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 OR1L1Q8NH94 360 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 BCL2L14Q9BZR8 327 aa15.59■□□□□ 0.09
PRPF40B-208ENST00000548436 TMEM30CPA0ZSE6 113 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 H2AFB1P0C5Y9 115 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 BAXQ07812 192 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 AESQ08117 197 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 GUK1Q16774 197 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 FAM53AQ6NSI3 398 aaPredicted RBP15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 BHLHA15Q7RTS1 189 aaPredicted RBP15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 OR2G3Q8NGZ4 309 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 RNASE11Q8TAA1 199 aaKnown RBP15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 FAM213BQ8TBF2 198 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 LSM10Q969L4 123 aaKnown RBP15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 ABHD14AQ9BUJ0 271 aa15.58■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF292O60281 2723 aa15.58■□□□□ 0.08
PRPF40B-208ENST00000548436 C12orf77C9JDV5 145 aa15.58■□□□□ 0.08
PRPF40B-208ENST00000548436 ATP6V1G2-DDX39BF2Z307 99 aa15.58■□□□□ 0.08
PRPF40B-208ENST00000548436 OR3A1P47881 315 aa15.58■□□□□ 0.08
PRPF40B-208ENST00000548436 PPT1P50897 306 aa15.58■□□□□ 0.08
PRPF40B-208ENST00000548436 ZNF718Q3SXZ3 478 aa15.58■□□□□ 0.08
PRPF40B-208ENST00000548436 CACNG5Q9UF02 275 aa15.58■□□□□ 0.08
PRPF40B-208ENST00000548436 MBD3L4A6NDZ8 208 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 MBD3L3A6NE82 208 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 MBD3L5A6NJ08 208 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 OR5H1A6NKK0 313 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 H3BP45 60 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 PTBP3O95758 552 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 TUBG1P23258 451 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 PPP1CCP36873 323 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 MBNL2Q5VZF2 373 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 SLC35E4Q6ICL7 350 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 MBD3L2Q8NHZ7 208 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 COQ2Q96H96 371 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 ESRP2Q9H6T0 727 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 TUBG2Q9NRH3 451 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 LIN7CQ9NUP9 197 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 KCNIP1Q9NZI2 227 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 METRNQ9UJH8 293 aa15.57■□□□□ 0.08
PRPF40B-208ENST00000548436 PIGBOS1A0A0B4J2F0 54 aa15.56■□□□□ 0.08
PRPF40B-208ENST00000548436 A0A1B0GV50 99 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms