RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 LHX4Q969G2 390 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 OR51I2Q9H344 312 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 RIMS4Q9H426 269 aaPredicted RBP15.04■□□□□ -0
RAB40C-205ENST00000539661 SLC39A9Q9NUM3 307 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 FGF12P61328 243 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 PRDX4Q13162 271 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 SPSB4Q96A44 273 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 PLK3Q9H4B4 646 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 IGKV1-6A0A0C4DH72 117 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 DNPH1O43598 174 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 DSCR4P56555 118 aaPredicted RBP15.03■□□□□ -0
RAB40C-205ENST00000539661 NXPH1P58417 271 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 NECAP1Q8NC96 275 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 SNHG12Q9BXW3 62 aa15.03■□□□□ -0
RAB40C-205ENST00000539661 TOX3O15405 576 aaPredicted RBP15.02■□□□□ -0
RAB40C-205ENST00000539661 FGF5P12034 268 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 PSMB3P49720 205 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 PCBD1P61457 104 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 ARL16Q0P5N6 197 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 MRPL41Q8IXM3 137 aaKnown RBP15.02■□□□□ -0
RAB40C-205ENST00000539661 OR2T10Q8NGZ9 312 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 R3HDM4Q96D70 268 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 PCGF1Q9BSM1 259 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 REPIN1Q9BWE0 567 aaKnown RBP15.02■□□□□ -0
RAB40C-205ENST00000539661 OR6C3Q9NZP0 311 aa15.02■□□□□ -0
RAB40C-205ENST00000539661 TNFSF12O43508 249 aa15.02□□□□□ -0.01
RAB40C-205ENST00000539661 PSG4Q00888 419 aa15.02□□□□□ -0.01
RAB40C-205ENST00000539661 RAET1LQ5VY80 246 aa15.02□□□□□ -0.01
RAB40C-205ENST00000539661 SYT13Q7L8C5 426 aa15.02□□□□□ -0.01
RAB40C-205ENST00000539661 MRPL52Q86TS9 123 aaKnown RBP15.02□□□□□ -0.01
RAB40C-205ENST00000539661 TDHQ8IZJ6 230 aa15.02□□□□□ -0.01
RAB40C-205ENST00000539661 BTF3L4Q96K17 158 aa15.02□□□□□ -0.01
RAB40C-205ENST00000539661 RBM14Q96PK6 669 aaKnown RBP15.02□□□□□ -0.01
RAB40C-205ENST00000539661 LRRC3CA6NJW4 275 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 C1orf194Q5T5A4 169 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 HAPLN4Q86UW8 402 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 STRADBQ9C0K7 418 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 OR2H1Q9GZK4 316 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 WNT5BQ9H1J7 359 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 OR2W1Q9Y3N9 320 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 ASCC3Q8N3C0 2202 aaKnown RBP15.01□□□□□ -0.01
RAB40C-205ENST00000539661 TRBV6-6A0A0A6YYG2 114 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 CD300LBA8K4G0 201 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 VENTXO95231 258 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 OR4A8P0C604 315 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 BCL3P20749 454 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 LCN2P80188 198 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 RELQ04864 619 aaPredicted RBP15.01□□□□□ -0.01
RAB40C-205ENST00000539661 PCSK4Q6UW60 755 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 MRPL30Q8TCC3 161 aaKnown RBP15.01□□□□□ -0.01
RAB40C-205ENST00000539661 TAF15Q92804 592 aaKnown RBP eCLIP15.01□□□□□ -0.01
RAB40C-205ENST00000539661 PARLQ9H300 379 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 MANBALQ9NQG1 85 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 CACNG5Q9UF02 275 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 FUT9Q9Y231 359 aa15.01□□□□□ -0.01
RAB40C-205ENST00000539661 KIR2DL5BA0A0G2JN68 375 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 KIR2DL5BA0A0G2JPC4 375 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 A0A1W2PPQ1 181 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 PSG2P11465 335 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 LIFP15018 202 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 RAC1P63000 192 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 ZNF324BQ6AW86 544 aaPredicted RBP15□□□□□ -0.01
RAB40C-205ENST00000539661 KCNIP4Q6PIL6 250 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 Q6ZRM9 215 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 KIR2DL5AQ8N109 375 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 TSTD1Q8NFU3 115 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 ZDBF2Q9HCK1 2354 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 KIAA1549Q9HCM3 1950 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 TMEM210A6NLX4 147 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 GJE1A6NN92 205 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 ZIC3O60481 467 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 CYC1P08574 325 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 COX5BP10606 129 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 CNN1P51911 297 aaKnown RBP15□□□□□ -0.01
RAB40C-205ENST00000539661 TMEM37Q8WXS4 190 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 RPUSD4Q96CM3 377 aaKnown RBP15□□□□□ -0.01
RAB40C-205ENST00000539661 OR4C12Q96R67 309 aa15□□□□□ -0.01
RAB40C-205ENST00000539661 A0A0J9YW62 118 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 M0QZK8 103 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 TNFSF11O14788 317 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 IAPPP10997 89 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 B4GALT1P15291 398 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 CASP6P55212 293 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 RPP25LQ8N5L8 163 aaKnown RBP14.99□□□□□ -0.01
RAB40C-205ENST00000539661 C1QTNF5Q9BXJ0 243 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 PRDM14Q9GZV8 571 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 FKBP11Q9NYL4 201 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 SCRG1O75711 98 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 TDGF1P3P51864 188 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 ELLP55199 621 aaPredicted RBP14.99□□□□□ -0.01
RAB40C-205ENST00000539661 IMMP2LQ96T52 175 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 ELOVL1Q9BW60 279 aa14.99□□□□□ -0.01
RAB40C-205ENST00000539661 CTXND1A0A1B0GTU2 59 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 TIAF1O95411 115 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 MBP02144 154 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 EDN3P14138 238 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 TEX38Q6PEX7 206 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 LINC00596Q86U02 117 aa14.98□□□□□ -0.01
RAB40C-205ENST00000539661 OR51H1Q8NH63 302 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms