RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FAM71E2Q8N5Q1 922 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 OR10V1Q8NGI7 309 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CT45A3Q8NHU0 189 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 FBLIM1Q8WUP2 373 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 HSPB9Q9BQS6 159 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 HBZP02008 142 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 LUMP51884 338 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 F2RL1P55085 397 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 RPS11P62280 158 aaKnown RBP eCLIP15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CFHR3Q02985 330 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 C9orf66Q5T8R8 295 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 STEAP3Q658P3 488 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 GAPTQ8N292 157 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 OR1L1Q8NH94 360 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TMEM80Q96HE8 168 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 NKX1-2Q9UD57 310 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 PEX16Q9Y5Y5 336 aa15.41■□□□□ 0.06
TNFRSF1B-204ENST00000536782 A0A1W2PPK0 400 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ERICH4A6NGS2 130 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CA11O75493 328 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 IGHG4P01861 327 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 IGF1P05019 195 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 GNAO1P09471 354 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 VSIG8P0DPA2 414 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 VHLP40337 213 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 AWAT2Q6E213 333 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CDH26Q8IXH8 852 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ZFP41Q8N8Y5 198 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 C4orf3Q8WVX3 66 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 PGLYRP3Q96LB9 341 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 OR14A2Q96R54 314 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CNOT2Q9NZN8 540 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ZNF580Q9UK33 172 aa15.4■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TRBV5-7A0A0A0MS05 114 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 FAM90A10PA6NDY2 464 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 EFCAB10A6NFE3 127 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 FAM90A7PA6NKC0 464 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 FAM90A23PA8MXZ1 464 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 SC5DO75845 299 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MAS1P04201 325 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 NHLRC4P0CG21 123 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 OR5H8P0DN80 308 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 RCC1P18754 421 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 RBMXL1Q96E39 390 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 KCTD7Q96MP8 289 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 SELENOIQ9C0D9 397 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 BANF2Q9H503 90 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 OR2S2Q9NQN1 319 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 PLCXD1Q9NUJ7 323 aa15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ZNF107Q9UII5 783 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1B-204ENST00000536782 SEC14L6B5MCN3 397 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 LANCL1O43813 399 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 GLAP06280 429 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MGMTP16455 207 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 FUT3P21217 361 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 PSMB8P28062 276 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 TAS2R43P59537 309 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 LSAMPQ13449 338 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MMDQ15546 238 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MORN2Q502X0 79 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ZNF485Q8NCK3 441 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 GGHQ92820 318 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 CHCHD6Q9BRQ6 235 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 TAF9BQ9HBM6 251 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 KCNIP1Q9NZI2 227 aa15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 LSM4Q9Y4Z0 139 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1B-204ENST00000536782 UBE2QL1A1L167 161 aa15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 CRTAPO75718 401 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 SLC2A2P11168 524 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MYF6P23409 242 aa15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 LAIR2Q6ISS4 152 aa15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 Q96M66 194 aa15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 PRR25Q96S07 402 aa15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MBNL3Q9NUK0 354 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1B-204ENST00000536782 PNMA8CA0A1B0GUJ8 204 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ECI1P42126 302 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ST3GAL4Q11206 333 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 FHL3Q13643 280 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 DOC2BQ14184 412 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ZNF554Q86TJ5 538 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 OR11H1Q8NG94 326 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 NRG4Q8WWG1 115 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 DERL3Q96Q80 235 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 ABHD14AQ9BUJ0 271 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 VCX3BQ9H321 246 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 PSORS1C1Q9UIG5 152 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 SCOCQ9UIL1 159 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 JPT1Q9UK76 154 aa15.36■□□□□ 0.05
TNFRSF1B-204ENST00000536782 AQP4P55087 323 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 GNMTQ14749 295 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 SIGIRRQ6IA17 410 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 TMEM65Q6PI78 240 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 LYPD6Q86Y78 171 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 NKAIN3Q8N8D7 197 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 OR52L2PQ8NGH6 319 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 MYOZ3Q8TDC0 251 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 UBE2E2Q96LR5 201 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 U3KQK5 164 aa15.35■□□□□ 0.05
TNFRSF1B-204ENST00000536782 PDCD6O75340 191 aa15.34■□□□□ 0.05
TNFRSF1B-204ENST00000536782 PPIFP30405 207 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms