RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OR52M1Q8NGK5 317 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 FAM216AQ8WUB2 273 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 NUDCD2Q8WVJ2 157 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 IL1F10Q8WWZ1 152 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 TMEM158Q8WZ71 300 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 MALSU1Q96EH3 234 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 RIMS4Q9H426 269 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-224ENST00000523873 OR2S2Q9NQN1 319 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 OR1A1Q9P1Q5 309 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 DPM3Q9P2X0 92 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 COMMD3Q9UBI1 195 aa10.35□□□□□ -0.75
VEGFA-224ENST00000523873 IGKV1D-8A0A087WSZ0 117 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 LEUTXA8MZ59 168 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 GPR137BO60478 399 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 EIF4EP06730 217 aaKnown RBP10.34□□□□□ -0.75
VEGFA-224ENST00000523873 CD24P25063 80 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 RORCP51449 518 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 MADCAM1Q13477 382 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 MORN2Q502X0 79 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 CT45A1Q5HYN5 189 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 UBE2NLQ5JXB2 153 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 ZNF439Q8NDP4 499 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 CT45A3Q8NHU0 189 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 PIFOQ8TCI5 191 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 GALMQ96C23 342 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 RBMXL1Q96E39 390 aaKnown RBP10.34□□□□□ -0.75
VEGFA-224ENST00000523873 PARP12Q9H0J9 701 aaKnown RBP10.34□□□□□ -0.75
VEGFA-224ENST00000523873 DPAGT1Q9H3H5 408 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 RAB9BQ9NP90 201 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.34□□□□□ -0.759e-6■□□□□ 9.4
VEGFA-224ENST00000523873 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 POMT1Q9Y6A1 747 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 CEPT1Q9Y6K0 416 aa10.34□□□□□ -0.75
VEGFA-224ENST00000523873 IGKV1-6A0A0C4DH72 117 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 BTBD17A6NE02 478 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 SERPINE3A8MV23 424 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 SSX5O60225 188 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 HPGDSO60760 199 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 TMEM127O75204 238 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 FCER2P06734 321 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 GSTT2P0CG29 244 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 GSTT2BP0CG30 244 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 TALDO1P37837 337 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 REG1BP48304 166 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 TMBIM6P55061 237 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 ACTG1P63261 375 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 HERPUD1Q15011 391 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 HACD4Q5VWC8 232 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 ZNF554Q86TJ5 538 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 OR10X1Q8NGY0 326 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 RAB2BQ8WUD1 216 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 ZFAND2BQ8WV99 257 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 RPEQ96AT9 228 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 PHF21AQ96BD5 680 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 ISOC1Q96CN7 298 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
VEGFA-224ENST00000523873 SLC23A1Q9UHI7 598 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 JPT1Q9UK76 154 aa10.33□□□□□ -0.76
VEGFA-224ENST00000523873 AMMECR1Q9Y4X0 333 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-224ENST00000523873 TRDCB7Z8K6 153 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 H3BMQ9 156 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 FABP7O15540 132 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 CHST1O43916 411 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 YPEL1O60688 119 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 SCGNO76038 276 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 GSTP1P09211 210 aaKnown RBP10.32□□□□□ -0.76
VEGFA-224ENST00000523873 GNG2P59768 71 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 HTD2P86397 168 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 IGSF11Q5DX21 431 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 CCBE1Q6UXH8 406 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-224ENST00000523873 SLC25A48Q6ZT89 311 aaKnown RBP10.32□□□□□ -0.76
VEGFA-224ENST00000523873 TMEM219Q86XT9 240 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 LYG1Q8N1E2 194 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 OR5R1Q8NH85 324 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 GCDHQ92947 438 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-224ENST00000523873 YPEL2Q96QA6 119 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 OCSTAMPQ9BR26 566 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 ABCG5Q9H222 651 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 AUNIPQ9H7T9 357 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 DIABLOQ9NR28 239 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 ABCB10Q9NRK6 738 aa10.32□□□□□ -0.76
VEGFA-224ENST00000523873 A0A1W2PPI3 338 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 MEIS3P1A6NDR6 274 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 CCDC160A6NGH7 325 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 VGLL3A8MV65 326 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 HSD17B6O14756 317 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 NOL3O60936 208 aaKnown RBP10.31□□□□□ -0.76
VEGFA-224ENST00000523873 ZNF182P17025 639 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-224ENST00000523873 ELK1P19419 428 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 CEACAM3P40198 252 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 TAS2R20P59543 309 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 RELBQ01201 579 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 ARL6IP1Q15041 203 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 AANATQ16613 207 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 PNLIPRP3Q17RR3 467 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms