RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 LOXL3P58215 753 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 GNMTQ14749 295 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 C22orf42Q6IC83 251 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 TRAT1Q6PIZ9 186 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 SLC16A12Q6ZSM3 486 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 C16orf82Q7Z2V1 217 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 CENPVQ7Z7K6 275 aaPredicted RBP7.5□□□□□ -1.21
DDX41-209ENST00000508279 SPARTQ8N0X7 666 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 OR8H3Q8N146 312 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 OR52L2PQ8NGH6 319 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 OR52M1Q8NGK5 317 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 IL1F10Q8WWZ1 152 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 FAM3DQ96BQ1 224 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 RBMXL1Q96E39 390 aaKnown RBP7.5□□□□□ -1.21
DDX41-209ENST00000508279 MMP27Q9H306 513 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 LIN7BQ9HAP6 207 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 MOB4Q9Y3A3 225 aa7.5□□□□□ -1.21
DDX41-209ENST00000508279 IGHV1-3A0A0C4DH29 117 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 A0A1W2PRX2 142 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 NCBP2LA6PVI3 153 aaKnown RBP7.49□□□□□ -1.21
DDX41-209ENST00000508279 PDCD5O14737 125 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 CA11O75493 328 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 QRFPP83859 136 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 C2orf76Q3KRA6 126 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 KHDC1LQ5JSQ8 128 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 OR2W3Q7Z3T1 314 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 Q8N2B8 174 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 OCSTAMPQ9BR26 566 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 HDHD3Q9BSH5 251 aaPredicted RBP7.49□□□□□ -1.21
DDX41-209ENST00000508279 TM2D1Q9BX74 207 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 LPAR5Q9H1C0 372 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 NDUFB11Q9NX14 153 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 ABRACLQ9P1F3 81 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 STEAP1Q9UHE8 339 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 AK3Q9UIJ7 227 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 LRRC42Q9Y546 428 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 TRRAPQ9Y4A5 3859 aa7.49□□□□□ -1.21
DDX41-209ENST00000508279 MGAM2Q2M2H8 2515 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 A0A075B6Q4 140 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 A0A0B4J203 849 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 TMEM272A0A1B0GTI8 110 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 TRDV1A0A1B0GX56 115 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 SHISA3A0PJX4 238 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 MRPS14O60783 128 aaKnown RBP7.48□□□□□ -1.21
DDX41-209ENST00000508279 RAB3BP20337 219 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 PSMD7P51665 324 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 ZNF134P52741 427 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 ZNF816Q0VGE8 651 aaPredicted RBP7.48□□□□□ -1.21
DDX41-209ENST00000508279 PLA2G7Q13093 441 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 MORN2Q502X0 79 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 CT45A1Q5HYN5 189 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 SLC25A48Q6ZT89 311 aaKnown RBP7.48□□□□□ -1.21
DDX41-209ENST00000508279 THNSL2Q86YJ6 484 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 TGIF2LXQ8IUE1 241 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 LINC00311Q8N616 119 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 OR5AU1Q8NGC0 362 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 CT45A3Q8NHU0 189 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 RTN4IP1Q8WWV3 396 aaPredicted RBP7.48□□□□□ -1.21
DDX41-209ENST00000508279 CFHR4Q92496 578 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 GALMQ96C23 342 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 ARHGAP5-AS1Q96IT6 56 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 CITED2Q99967 270 aaPredicted RBP7.48□□□□□ -1.21
DDX41-209ENST00000508279 ABHD14AQ9BUJ0 271 aa7.48□□□□□ -1.21
DDX41-209ENST00000508279 YTHDF1Q9BYJ9 559 aaKnown RBP7.48□□□□□ -1.21
DDX41-209ENST00000508279 MBNL3Q9NUK0 354 aaKnown RBP7.48□□□□□ -1.21
DDX41-209ENST00000508279 FAM90A9PA6NNJ1 464 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 ZNF736B4DX44 427 aaPredicted RBP7.47□□□□□ -1.21
DDX41-209ENST00000508279 M0QZK8 103 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 PLXNB1O43157 2135 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 HSPA12AO43301 675 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 RGS11O94810 467 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 AMY1AP04745 511 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 AMY2AP04746 511 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 RANBP1P43487 201 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 MRPS15P82914 257 aaKnown RBP7.47□□□□□ -1.21
DDX41-209ENST00000508279 HMGN3Q15651 99 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 NEDD8Q15843 81 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 TMEM30BQ3MIR4 351 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 UBE2UQ5VVX9 321 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 ZNF773Q6PK81 442 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 C1QL4Q86Z23 238 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 GAPTQ8N292 157 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 ZNF439Q8NDP4 499 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 OR56B1Q8NGI3 324 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 OR2T10Q8NGZ9 312 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 FCGR1BQ92637 280 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 R3HDM4Q96D70 268 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 EAF1Q96JC9 268 aaPredicted RBP7.47□□□□□ -1.21
DDX41-209ENST00000508279 CMSS1Q9BQ75 279 aaKnown RBP7.47□□□□□ -1.21
DDX41-209ENST00000508279 PECRQ9BY49 303 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 SLC23A1Q9UHI7 598 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 LINC00527Q9UJ94 153 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 JPT1Q9UK76 154 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 RAB22AQ9UL26 194 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 STUB1Q9UNE7 303 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 SSR3Q9UNL2 185 aa7.47□□□□□ -1.21
DDX41-209ENST00000508279 VWFP04275 2813 aa7.46□□□□□ -1.22
DDX41-209ENST00000508279 TRAV1-2A0A0B4J238 106 aa7.46□□□□□ -1.22
DDX41-209ENST00000508279 LOC100506127A0A0U1RQW1 187 aa7.46□□□□□ -1.22
DDX41-209ENST00000508279 TCRBV4S1A1TA0A5B7 111 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms