RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ANAPC10Q9UM13 185 aa4.01□□□□□ -1.77
NIPBL-204ENST00000504430 KCNE3Q9Y6H6 103 aa4.01□□□□□ -1.77
NIPBL-204ENST00000504430 COL11A2P13942 1736 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-204ENST00000504430 DNAJC9-AS1A6NH13 148 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 I3L4J1 428 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 CT45A10P0DMU9 189 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 PLA2G2AP14555 144 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 ZNF20P17024 532 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 CCL23P55773 120 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 C17orf58Q2M2W7 97 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 PAGE3Q5JUK9 113 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 HAGHLQ6PII5 290 aaPredicted RBP4□□□□□ -1.77
NIPBL-204ENST00000504430 RASL11AQ6T310 242 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 C11orf53Q8IXP5 236 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 OR8I2Q8N0Y5 310 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 GPR82Q96P67 336 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 THTPAQ9BU02 230 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 DOHHQ9BU89 302 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 LRRC61Q9BV99 259 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 PBDC1Q9BVG4 233 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 ZNF629Q9UEG4 869 aaPredicted RBP4□□□□□ -1.77
NIPBL-204ENST00000504430 WI2-2373I1.2A0A1W2PRP0 233 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 FAM181BA6NEQ2 426 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 J3KT08 172 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 TNFSF15O95150 251 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 CXorf1O96002 111 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 OR5G3P0C626 314 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 NTF3P20783 257 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 NPY1RP25929 384 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 TAF6P49848 677 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 IL15RAQ13261 267 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 LRRC28Q86X40 367 aaPredicted RBP4□□□□□ -1.77
NIPBL-204ENST00000504430 OR11H6Q8NGC7 330 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 ZNF675Q8TD23 568 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 GEMIN6Q8WXD5 167 aaKnown RBP4□□□□□ -1.77
NIPBL-204ENST00000504430 ROPN1LQ96C74 230 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 SOSTQ9BQB4 213 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 C20orf202A1L168 122 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 E7EQ34 232 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 H7C1C5 153 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 LMX1BO60663 402 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 ZFAND5O76080 213 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 CDRT1O95170 752 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 CCNE2O96020 404 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 METTL15P1P0C7V9 234 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 MYL9P24844 172 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 VEGFCP49767 419 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 LCN6P62502 163 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 RAP1AP62834 184 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 C1orf100Q5SVJ3 147 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 ZFAND6Q6FIF0 208 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 OR2T27Q8NH04 317 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 OR5W2Q8NH69 310 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 ERMAPQ96PL5 475 aaPredicted RBP4□□□□□ -1.77
NIPBL-204ENST00000504430 SULT4A1Q9BR01 284 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 HEBP1Q9NRV9 189 aa4□□□□□ -1.77
NIPBL-204ENST00000504430 IGSF9BQ9UPX0 1349 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 IGHV4-4A0A075B6R2 117 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 TRAV8-3A0A0A6YYJ7 113 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 DUXBA0A1W2PPF3 345 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 FAM172BPA6NC97 362 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 C9JAW5 83 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 PTHP01270 115 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 SMIM17P0DL12 118 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 ERGP11308 486 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 ZNF30P17039 623 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 SPRP35270 261 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-204ENST00000504430 HES3Q5TGS1 186 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 KMT2EQ8IZD2 1858 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 ANKRD29Q8N6D5 301 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 SLC30A7Q8NEW0 376 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 OR52P1PQ8NH57 321 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 PSMB7Q99436 277 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 OR2D2Q9H210 308 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 LHX9Q9NQ69 397 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 HIGD1AQ9Y241 93 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 FGD6Q6ZV73 1430 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 SHISA9B4DS77 424 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 CCL25O15444 150 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 MMP23AO75900 390 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 LGALS1P09382 135 aaKnown RBP3.99□□□□□ -1.77
NIPBL-204ENST00000504430 S100A11P31949 105 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 FKBP3Q00688 224 aaKnown RBP3.99□□□□□ -1.77
NIPBL-204ENST00000504430 IFITM3Q01628 133 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 NARS2Q96I59 477 aaKnown RBP3.99□□□□□ -1.77
NIPBL-204ENST00000504430 C18orf15Q96N68 181 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 SERPINI1Q99574 410 aa3.99□□□□□ -1.77
NIPBL-204ENST00000504430 SCAND2PQ9GZW5 306 aaPredicted RBP3.99□□□□□ -1.77
NIPBL-204ENST00000504430 RSL24D1Q9UHA3 163 aaKnown RBP3.99□□□□□ -1.77
NIPBL-204ENST00000504430 RPUSD1Q9UJJ7 312 aaKnown RBP3.99□□□□□ -1.77
NIPBL-204ENST00000504430 IGHV1-69DA0A0B4J2H0 117 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SIGLEC16A6NMB1 481 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 SS18L1O75177 396 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-204ENST00000504430 ORM2P19652 201 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 H2BFSP57053 126 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 TAS2R30P59541 319 aa3.98□□□□□ -1.77
NIPBL-204ENST00000504430 RPS24P62847 133 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms