RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 DEPPQ9NTK1 212 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 VAX2Q9UIW0 290 aa20.85■□□□□ 0.93
DDX41-202ENST00000503078 MRPS18CQ9Y3D5 142 aaKnown RBP20.85■□□□□ 0.93
DDX41-202ENST00000503078 IGKV1-39P01597 117 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 OPN1MWP04001 364 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 IGKV1D-39P04432 117 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 OPN1MW2P0DN77 364 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 OPN1MW3P0DN78 364 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 SERF2P84101 59 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 OR10V1Q8NGI7 309 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 PRRG4Q9BZD6 226 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 LINC00470Q9BZP3 86 aa20.84■□□□□ 0.93
DDX41-202ENST00000503078 TRAV24A0A0B4J272 114 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 CD300LBA8K4G0 201 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 MDH2P40926 338 aaKnown RBP20.83■□□□□ 0.93
DDX41-202ENST00000503078 GFRA1P56159 465 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 LRRC75BQ2VPJ9 315 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 C4orf17Q53FE4 359 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 MRGPRGQ86SM5 289 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 ZNF488Q96MN9 340 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 CTDSP1Q9GZU7 261 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 LRP5LA4QPB2 252 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 LY86O95711 162 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 HBG1P69891 147 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 HBG2P69892 147 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 Q0VFX4 171 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 HAPLN4Q86UW8 402 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 S100PBPQ96BU1 408 aa20.83■□□□□ 0.93
DDX41-202ENST00000503078 COX5BP10606 129 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 TCEAL6Q6IPX3 200 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 SSX3Q99909 188 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 IGKV3D-15A0A087WSY6 115 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 CEBPZOSA8MTT3 80 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 SS18L1O75177 396 aaPredicted RBP20.82■□□□□ 0.92
DDX41-202ENST00000503078 PGA5P0DJD9 388 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 GAMTQ14353 236 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 TMEM41BQ5BJD5 291 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 LILRB2Q8N423 598 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 IL1F10Q8WWZ1 152 aa20.82■□□□□ 0.92
DDX41-202ENST00000503078 RYDENQ9NUL5 291 aaKnown RBP20.82■□□□□ 0.92
DDX41-202ENST00000503078 COLQQ9Y215 455 aaPredicted RBP20.82■□□□□ 0.92
DDX41-202ENST00000503078 PINLYPA6NC86 204 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 DEGS1O15121 323 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 NGFP01138 241 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 IFNA1P01562 189 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 OR5P3Q8WZ94 311 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 OR1A1Q9P1Q5 309 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 IGKV1-5P01602 117 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 IGLV2-14P01704 120 aa20.81■□□□□ 0.92
DDX41-202ENST00000503078 TRA2AQ13595 282 aaKnown RBP eCLIP20.81■□□□□ 0.921e-6■□□□□ 9.3
DDX41-202ENST00000503078 PINX1Q96BK5 328 aaKnown RBP20.81■□□□□ 0.92
DDX41-202ENST00000503078 ZNF503-AS2A6NEH8 195 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 IGHEP01854 428 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 WDR25Q64LD2 544 aaPredicted RBP20.8■□□□□ 0.92
DDX41-202ENST00000503078 PPP1R32Q7Z5V6 425 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 FAM58AQ8N1B3 248 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 C14orf144Q96I85 54 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 PACRGQ96M98 296 aaPredicted RBP20.8■□□□□ 0.92
DDX41-202ENST00000503078 WDR61Q9GZS3 305 aaKnown RBP20.8■□□□□ 0.92
DDX41-202ENST00000503078 CDH20Q9HBT6 801 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 DLL3Q9NYJ7 618 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 PITPNC1Q9UKF7 332 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 MAP1LC3B2A6NCE7 125 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 NPIPB11E5RHQ5 1161 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 OTX2P32243 289 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 UBALD2Q8IYN6 164 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 RHOVQ96L33 236 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 SNX22Q96L94 193 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 PARD6GQ9BYG4 376 aaPredicted RBP20.8■□□□□ 0.92
DDX41-202ENST00000503078 MAP1LC3BQ9GZQ8 125 aa20.8■□□□□ 0.92
DDX41-202ENST00000503078 NTN3O00634 580 aaPredicted RBP20.79■□□□□ 0.92
DDX41-202ENST00000503078 C17orf78Q8N4C9 275 aa20.79■□□□□ 0.92
DDX41-202ENST00000503078 HIST1H2BLQ99880 126 aa20.79■□□□□ 0.92
DDX41-202ENST00000503078 RBKSQ9H477 322 aa20.79■□□□□ 0.92
DDX41-202ENST00000503078 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.79■□□□□ 0.92
DDX41-202ENST00000503078 FOXG1P55316 489 aaPredicted RBP20.79■□□□□ 0.92
DDX41-202ENST00000503078 ZNF573Q86YE8 665 aa20.79■□□□□ 0.92
DDX41-202ENST00000503078 PPP1R3CQ9UQK1 317 aa20.79■□□□□ 0.92
DDX41-202ENST00000503078 PKIAP61925 76 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 CLN3Q13286 438 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 PMS2P11Q13670 270 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 OR10A7Q8NGE5 316 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 OR4C12Q96R67 309 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 NAT8Q9UHE5 227 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 PILRBQ9UKJ0 227 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 ZNF407Q9C0G0 2248 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 ZNF737O75373 536 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 SPINK2P20155 84 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 CYB561P49447 251 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 ELLP55199 621 aaPredicted RBP20.78■□□□□ 0.92
DDX41-202ENST00000503078 TESK1Q15569 626 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 FAM180AQ6UWF9 173 aa20.78■□□□□ 0.92
DDX41-202ENST00000503078 ANKRD30BLA7E2S9 258 aa20.77■□□□□ 0.92
DDX41-202ENST00000503078 C3orf80F5H4A9 247 aa20.77■□□□□ 0.92
DDX41-202ENST00000503078 HOXA6P31267 233 aa20.77■□□□□ 0.92
DDX41-202ENST00000503078 GNG3P63215 75 aa20.77■□□□□ 0.92
DDX41-202ENST00000503078 SRYQ05066 204 aa20.77■□□□□ 0.92
DDX41-202ENST00000503078 ZNF585BQ52M93 769 aa20.77■□□□□ 0.92
DDX41-202ENST00000503078 SPANXN5Q5MJ07 72 aa20.77■□□□□ 0.92
DDX41-202ENST00000503078 TUSC5Q8IXB3 177 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms