RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 HSD17B6O14756 317 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 HSMCR30P0CW71 290 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 MGMTP16455 207 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 FUT3P21217 361 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 CD1BP29016 333 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 LTC4SQ16873 150 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 CT45A1Q5HYN5 189 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 C1orf100Q5SVJ3 147 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 ATAD3CQ5T2N8 411 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 SYT6Q5T7P8 510 aaPredicted RBP7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 RAB12Q6IQ22 244 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 GPR141Q7Z602 305 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 LRRTM1Q86UE6 522 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 TGIF2LXQ8IUE1 241 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 JAGN1Q8N5M9 183 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 OR4X2Q8NGF9 303 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 CT45A3Q8NHU0 189 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 CCDC107Q8WV48 283 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 RTN4IP1Q8WWV3 396 aaPredicted RBP7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 PHYHIPQ92561 330 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 UFD1Q92890 307 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 PHF21AQ96BD5 680 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 MGLLQ99685 303 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 BATF3Q9NR55 127 aa7.68□□□□□ -1.18
TMEM39A-210ENST00000490099 PSMB11A5LHX3 300 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 LINC01548A6NM66 108 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 AIPO00170 330 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 SLC31A2O15432 143 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 IGKV1D-33P01593 117 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 IGKV1-33P01594 117 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 HBZP02008 142 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 TFAP2AP05549 437 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 TMEM11P17152 192 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 RCC1P18754 421 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 PSMA1P25786 263 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 MAPK3P27361 379 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 SLC6A1P30531 599 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ALDH3B2P48448 385 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 GNG10P50151 68 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 QRFPP83859 136 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 HNF4GQ14541 408 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 INSL4Q14641 139 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 TRAM1Q15629 374 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 TIMM50Q3ZCQ8 353 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ACSM3Q53FZ2 586 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 TRAT1Q6PIZ9 186 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ETV3LQ6ZN32 361 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 COMMD1Q8N668 190 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 LINC00482Q8N8I6 264 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 RNF152Q8N8N0 203 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 Q8N9W7 124 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 OR8H1Q8NGG4 311 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 OR2T10Q8NGZ9 312 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 CHPT1Q8WUD6 406 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 CYYR1Q96J86 154 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 SELENOIQ9C0D9 397 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ABCG5Q9H222 651 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 BANF2Q9H503 90 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ZFP57Q9NU63 452 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ETAA1Q9NY74 926 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 NDUFA13Q9P0J0 144 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ZNF580Q9UK33 172 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 PEX16Q9Y5Y5 336 aa7.67□□□□□ -1.18
TMEM39A-210ENST00000490099 ZNF736B4DX44 427 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 SPINT2O43291 252 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 LANCL1O43813 399 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 NOL3O60936 208 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 PDCD6O75340 191 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 DUS4LO95620 317 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 MAS1P04201 325 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 UCHL1P09936 223 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 UBBP0CG47 229 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 IGLL1P15814 213 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 CPEP16870 476 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 CD33P20138 364 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 CHATP28329 748 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 RPL23AP62750 156 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 HTD2P86397 168 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 EGFEM1PQ0D2K5 195 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 TPBGQ13641 420 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 MORN2Q502X0 79 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 C6orf183Q5T699 404 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 FOXB2Q5VYV0 432 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 AWAT2Q6E213 333 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 ZNF329Q86UD4 541 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 FAM71E2Q8N5Q1 922 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 OR13F1Q8NGS4 319 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 OR4K15Q8NH41 348 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 OR1L1Q8NH94 360 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 UBALD1Q8TB05 177 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 NOL4LQ96MY1 436 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 TM2D1Q9BX74 207 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 TAF9BQ9HBM6 251 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 RAB9BQ9NP90 201 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 LIN7CQ9NUP9 197 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 TRAPPC2LQ9UL33 140 aa7.66□□□□□ -1.18
TMEM39A-210ENST00000490099 IGHV3-72A0A0B4J1Y9 119 aa7.65□□□□□ -1.18
TMEM39A-210ENST00000490099 PNMA8CA0A1B0GUJ8 204 aa7.65□□□□□ -1.18
TMEM39A-210ENST00000490099 SMIM31A0A1B0GVY4 71 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms