RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CXorf40BQ96DE9 158 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ACY3Q96HD9 319 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2M4Q96R27 311 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 IMMP2LQ96T52 175 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 PHB2Q99623 299 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 COPS8Q99627 209 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BNQ99877 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BMQ99879 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC6A7Q99884 636 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC25A21Q9BQT8 299 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SULT4A1Q9BR01 284 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 MRPL45Q9BRJ2 306 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 C19orf24Q9BVV8 132 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SCRT1Q9BWW7 348 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF471Q9BX82 626 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SUCNR1Q9BXA5 334 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC25A31Q9H0C2 315 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 PRO1933Q9H354 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SRMSQ9H3Y6 488 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM185BQ9H7F4 350 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 AUNIPQ9H7T9 357 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 LRTM1Q9HBL6 345 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SGK2Q9HBY8 427 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CYTL1Q9NRR1 136 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 GPATCH2LQ9NWQ4 482 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 DDIT4Q9NX09 232 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 COMMD9Q9P000 198 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SPRR3Q9UBC9 169 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 GNG12Q9UBI6 72 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 PEF1Q9UBV8 284 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 GNG8Q9UK08 70 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 RPH3ALQ9UNE2 315 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CELA1Q9UNI1 258 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 RASD1Q9Y272 281 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 PIGLQ9Y2B2 252 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF256Q9Y2P7 627 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 YARS2Q9Y2Z4 477 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CSDC2Q9Y534 153 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 PATJQ8NI35 1801 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 PHIPQ8WWQ0 1821 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 COL4A4P53420 1690 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 YLPM1P49750 1951 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 TRBV24-1A0A075B6N3 115 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 A0A0A6YYH2 397 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 TRAV25A0A0B4J276 109 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 MGAT4DA6NG13 374 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 A6NJ64 397 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 SUPT3HB4E1H0 165 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 E7EQ34 232 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 GOSR2O14653 212 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 CDIPTO14735 213 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10H3O60404 316 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 CDC40O60508 579 aaKnown RBP eCLIP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 GCM2O75603 506 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 ARL6IP5O75915 188 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 DIRAS1O95057 198 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 TNFSF15O95150 251 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 CST2P09228 141 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 CT62P0C5K7 136 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 TDGF1P13385 188 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 HTR1FP30939 366 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10J1P30954 320 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 ARL2P36404 184 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 PPICP45877 212 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR3A4PP47883 348 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 RPL29P47914 159 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 CX3CR1P49238 355 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 RND2P52198 227 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 RPS23P62266 143 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 RPS15P62841 145 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 H3F3AP84243 136 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 FAM3AP98173 230 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 LAGE3Q14657 143 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 TAF9Q16594 264 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 BSXQ3C1V8 233 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM176BQ3YBM2 270 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 FAM120AOSQ5T036 256 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 C9orf135Q5VTT2 229 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 MFSD14CQ5VZR4 134 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2A2Q6IF42 318 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 FAM71F2Q6NXP2 309 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 C1orf94Q6P1W5 598 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 TNFAIP8L2Q6P589 184 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 UNQ9370/PRO34162Q6UXP9 181 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF620Q6ZNG0 422 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 MOB1BQ7L9L4 216 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 MTURNQ8N3F0 131 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 INO80EQ8NBZ0 244 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 LFNGQ8NES3 379 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 NOXO1Q8NFA2 376 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 STXBP6Q8NFX7 210 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2T33Q8NG76 320 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR5D16Q8NGK9 328 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR5L2Q8NGL0 311 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR4D5Q8NGN0 318 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10G4Q8NGN3 311 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 OR51F2Q8NH61 342 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 KCNG3Q8TAE7 436 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 ASB17Q8WXJ9 295 aa2.78□□□□□ -1.96
ECHDC1-217ENST00000488087 RGP1Q92546 391 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms