RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 CTRLP40313 264 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 MTCP1P56278 107 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 MLF1P58340 268 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 OR4D5Q8NGN0 318 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 TNFRSF14Q92956 283 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 C11orf1Q9H5F2 150 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF430Q9H8G1 570 aaPredicted RBP9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 UQCR10Q9UDW1 63 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 ANXA10Q9UJ72 324 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 MUC3AQ02505 3323 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 CLEC18AA5D8T8 446 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 AQP7P3A6NL99 342 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 E9PLN8 166 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 MMP23AO75900 390 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 DHRS3O75911 302 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 RIPPLY3P57055 190 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 LINC00310P59036 64 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 VAMP3Q15836 100 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 FAM180AQ6UWF9 173 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 CLEC18CQ8NCF0 446 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 NFAM1Q8NET5 270 aaPredicted RBP9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 OR4B1Q8NGF8 309 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 C10orf35Q96D05 121 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF845Q96IR2 970 aaPredicted RBP9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 HIPK2Q9H2X6 1198 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 VSIRQ9H7M9 311 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF726P1Q15940 193 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 MORN2Q502X0 79 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 LIAT1Q6ZQX7 453 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 ODF3L1Q8IXM7 274 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 C7orf61Q8IZ16 206 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 SLC38A9Q8NBW4 561 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 BTF3L4Q96K17 158 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 Q96M66 194 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 OXGR1Q96P68 337 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 PLK3Q9H4B4 646 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 PLEKHF2Q9H8W4 249 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 LYRM2Q9NU23 88 aaPredicted RBP9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 LOC102725191A0A1B0GVB3 256 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 A0A1W2PR77 199 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 LMO7DNF2Z398 122 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 IGLC2P0DOY2 106 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 IGLC3P0DOY3 106 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 PSG1P11464 419 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF154Q13106 437 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 SHBQ15464 509 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 ABCA11PQ4W5N1 156 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 C6orf201Q7Z4U5 140 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 BCL2L2Q92843 193 aaPredicted RBP9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 LIN37Q96GY3 246 aaPredicted RBP9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 P2RX4Q99571 388 aa9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 HDHD3Q9BSH5 251 aaPredicted RBP9.93□□□□□ -0.82
SEC61A1-205ENST00000483956 SDK1Q7Z5N4 2213 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 TRAV30A0A087WSZ9 112 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 IGHV3-20A0A0C4DH32 117 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 A0A0U1RQK1 487 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 MSTNO14793 375 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 VAMP5O95183 116 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 FCGR2AP12318 317 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 TNFSF4P23510 183 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 FXYD4P59646 89 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 SUMO1P63165 101 aaKnown RBP9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 DEFB133Q30KQ1 61 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 FAM78BQ5VT40 261 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 MEX3BQ6ZN04 569 aaKnown RBP9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 TCF23Q7RTU1 214 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 CADM4Q8NFZ8 388 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 PLPPR1Q8TBJ4 325 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 GPR146Q96CH1 333 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 OR6C1Q96RD1 312 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 NXT1Q9UKK6 140 aaKnown RBP9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 C5orf63A6NC05 138 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 NKX2-6A6NCS4 301 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 SHISA7A6NL88 538 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 SMPD2O60906 423 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 KBTBD11O94819 623 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 NBEAP1P0C6P0 100 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 CD38P28907 300 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 EPHA8P29322 1005 aaPredicted RBP9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 ADMP35318 185 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 CDC34P49427 236 aaPredicted RBP9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 TAS2R30P59541 319 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 CARD17Q5XLA6 110 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 MSI2Q96DH6 328 aaKnown RBP9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 RBM24Q9BX46 236 aaKnown RBP9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 PLEKHJ1Q9NW61 149 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 KLRF1Q9NZS2 232 aa9.92□□□□□ -0.82
SEC61A1-205ENST00000483956 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF814B7Z6K7 855 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 SERF1AO75920 110 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 NXPH3O95157 252 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 PDGFBP01127 241 aaPredicted RBP9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 KRTDAPP60985 99 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 PAFAH1B2P68402 229 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 CFHR1Q03591 330 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 ANKRD37Q7Z713 158 aa9.91□□□□□ -0.82
SEC61A1-205ENST00000483956 MYPOPQ86VE0 399 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms