RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MRPL48Q96GC5 212 aaKnown RBP12.34□□□□□ -0.43
DDX56-210ENST00000479440 MYCBPQ99417 103 aaPredicted RBP12.34□□□□□ -0.43
DDX56-210ENST00000479440 TMED9Q9BVK6 235 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 METTL9Q9H1A3 318 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 IL36GQ9NZH8 169 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 ZNF581Q9P0T4 197 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 TRAPPC2LQ9UL33 140 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 RNF150Q9ULK6 438 aa12.34□□□□□ -0.43
DDX56-210ENST00000479440 TCRBV3S1A0A5B6 114 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 TMEM212A6NML5 194 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 G3V2T6 193 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 J3QLW9 94 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 NDUFA3O95167 84 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 ZNF19P17023 458 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 CNTFRP26992 372 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 CD40LGP29965 261 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 TPPP2P59282 170 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 NDPQ00604 133 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 RAB40BQ12829 278 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
DDX56-210ENST00000479440 TRAT1Q6PIZ9 186 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 PRR18Q8N4B5 295 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 ABHD5Q8WTS1 349 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 C4orf36Q96KX1 117 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 GABARAPL1Q9H0R8 117 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 A3GALT2U3KPV4 340 aa12.33□□□□□ -0.44
DDX56-210ENST00000479440 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
DDX56-210ENST00000479440 MT-ND4P03905 459 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 ZP3P21754 424 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 ZNF134P52741 427 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 TMEM267Q0VDI3 215 aaPredicted RBP12.32□□□□□ -0.44
DDX56-210ENST00000479440 LRRC36Q1X8D7 754 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 ASCL4Q6XD76 172 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 ZDHHC13Q8IUH4 622 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 NPBQ8NG41 125 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 CASTOR1Q8WTX7 329 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 S100A13Q99584 98 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 ABHD14AQ9BUJ0 271 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 MRPL20Q9BYC9 149 aaKnown RBP12.32□□□□□ -0.44
DDX56-210ENST00000479440 RIBC2Q9H4K1 309 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 SLA2Q9H6Q3 261 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 RETNQ9HD89 108 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 PAK1IP1Q9NWT1 392 aaPredicted RBP12.32□□□□□ -0.44
DDX56-210ENST00000479440 FBXO7Q9Y3I1 522 aa12.32□□□□□ -0.44
DDX56-210ENST00000479440 HBZP02008 142 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 SERPINA2P20848 420 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 PLGLAQ15195 96 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 ACTBL2Q562R1 376 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
DDX56-210ENST00000479440 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 OR51A2Q8NGJ7 313 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 DDB2Q92466 427 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 CIB1Q99828 191 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 NABP2Q9BQ15 211 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 CEPT1Q9Y6K0 416 aa12.31□□□□□ -0.44
DDX56-210ENST00000479440 ZNF780AO75290 641 aaPredicted RBP12.3□□□□□ -0.44
DDX56-210ENST00000479440 RGS11O94810 467 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 CDRT1O95170 752 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 GNGT1P63211 74 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 MRPL28Q13084 256 aaKnown RBP12.3□□□□□ -0.44
DDX56-210ENST00000479440 ZNF529Q6P280 563 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 CD200R1LQ6Q8B3 271 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 ACBD7Q8N6N7 88 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 OR5AK2Q8NH90 309 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 RHOVQ96L33 236 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 FAM110AQ9BQ89 295 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 JAM3Q9BX67 310 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 GABARAPL3Q9BY60 117 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 RANGRFQ9HD47 186 aaPredicted RBP12.3□□□□□ -0.44
DDX56-210ENST00000479440 IMPAD1Q9NX62 359 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 TAS2R4Q9NYW5 299 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 JPT1Q9UK76 154 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 ING4Q9UNL4 249 aa12.3□□□□□ -0.44
DDX56-210ENST00000479440 SHISA3A0PJX4 238 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 J3QRE1 110 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 CX3CL1P78423 397 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 ATP6AP1Q15904 470 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 Q8N402 240 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 OR9G4Q8NGQ1 327 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 OR1L1Q8NH94 360 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 RITA1Q96K30 269 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 ALG8Q9BVK2 526 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 OR2S2Q9NQN1 319 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 ETAA1Q9NY74 926 aa12.29□□□□□ -0.44
DDX56-210ENST00000479440 MCRIP1C9JLW8 97 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 RRHO14718 337 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 LY6G6CO95867 125 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 CD2P06729 351 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 T-ENOLP0DO92 83 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 GTF2F2P13984 249 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 ZNF93P35789 620 aaPredicted RBP12.28□□□□□ -0.44
DDX56-210ENST00000479440 PPP3R1P63098 170 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 MOGAT2Q3SYC2 334 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 MORN2Q502X0 79 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 DDI2Q5TDH0 399 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms