RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RSBN1Q5VWQ0 802 aaPredicted RBP11.77□□□□□ -0.53
USP11-207ENST00000478596 SLC35E4Q6ICL7 350 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 ZNF841Q6ZN19 808 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 ZNF497Q6ZNH5 498 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 PRR18Q8N4B5 295 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 MRGPRDQ8TDS7 321 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 C15orf40Q8WUR7 153 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 HDHD3Q9BSH5 251 aaPredicted RBP11.77□□□□□ -0.53
USP11-207ENST00000478596 NXF2Q9GZY0 626 aaKnown RBP11.77□□□□□ -0.53
USP11-207ENST00000478596 DPAGT1Q9H3H5 408 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 RAB9BQ9NP90 201 aa11.77□□□□□ -0.53
USP11-207ENST00000478596 TRAV39A0A0B4J263 110 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 hCG_1809904A0A1W2PP81 198 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 A0A1W2PPE2 198 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 A0A1W2PR64 198 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 A0A1W2PRV1 198 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 FABP12A6NFH5 140 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
USP11-207ENST00000478596 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
USP11-207ENST00000478596 TMEM50BP56557 158 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
USP11-207ENST00000478596 PNLIPRP3Q17RR3 467 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 METTL11BQ5VVY1 283 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 HACD4Q5VWC8 232 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 ZNF714Q96N38 554 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 WDFY2Q96P53 400 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 RIMS4Q9H426 269 aaPredicted RBP11.76□□□□□ -0.53
USP11-207ENST00000478596 AUNIPQ9H7T9 357 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 LINC00312Q9Y6C7 94 aa11.76□□□□□ -0.53
USP11-207ENST00000478596 STAB2Q8WWQ8 2551 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 CENPVL3A0A0U1RRI6 287 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 MEIS3P1A6NDR6 274 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 PTHLHP12272 177 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 TNFSF8P32971 234 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 PRSS3P35030 304 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 ZNF273Q14593 569 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 LTC4SQ16873 150 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 ZNF260Q3ZCT1 412 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 PYDC2Q56P42 97 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 C11orf88Q6PI97 169 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 ZNF565Q8N9K5 539 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 OR6Q1Q8NGQ2 317 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 CYYR1Q96J86 154 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 ZNF286AQ9HBT8 521 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 RABL2AQ9UBK7 228 aaPredicted RBP11.75□□□□□ -0.53
USP11-207ENST00000478596 MGAT4AQ9UM21 535 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 RABL2BQ9UNT1 228 aa11.75□□□□□ -0.53
USP11-207ENST00000478596 UBE2J1Q9Y385 318 aaPredicted RBP11.75□□□□□ -0.53
USP11-207ENST00000478596 SPINT2O43291 252 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 FCN3O75636 299 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 FCER2P06734 321 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 LPLP06858 475 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 FCGR3AP08637 254 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 CCL3L1P16619 93 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 CBX5P45973 191 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 ARPC4P59998 168 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 HLA-DRB3P79483 266 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 GUCA2AQ02747 115 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 C11orf91Q3C1V1 193 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 TMEM200BQ69YZ2 307 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 PYHIN1Q6K0P9 492 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 UBALD1Q8TB05 177 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 MRPL30Q8TCC3 161 aaKnown RBP11.74□□□□□ -0.53
USP11-207ENST00000478596 IL1F10Q8WWZ1 152 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 MAFIPQ8WZ33 124 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 PCGF1Q9BSM1 259 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 CALYQ9NYX4 217 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 VPREB3Q9UKI3 123 aa11.74□□□□□ -0.53
USP11-207ENST00000478596 ELF5Q9UKW6 265 aaPredicted RBP11.74□□□□□ -0.53
USP11-207ENST00000478596 A0A0U1RQK1 487 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 WI2-2373I1.2A0A1W2PRP0 233 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 ZNF729A6NN14 1252 aaPredicted RBP11.73□□□□□ -0.53
USP11-207ENST00000478596 RNASEK-C17orf49H0YIS7 233 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 MT-ND4P03905 459 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 DTYMKP23919 212 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 NFYBP25208 207 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 SSTR5P35346 364 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 KIR2DS4P43632 304 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 INPP1P49441 399 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 ARF6P62330 175 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 KIR2DS1Q14954 304 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 CASC10Q5T4H9 136 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 PRAMEF5Q5TYX0 476 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 ZNF782Q6ZMW2 699 aaPredicted RBP11.73□□□□□ -0.53
USP11-207ENST00000478596 WFDC9Q8NEX5 89 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 C8orf46Q8TAG6 207 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 ARL11Q969Q4 196 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 ST6GALNAC5Q9BVH7 336 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 KCNK7Q9Y2U2 307 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 U3KQK5 164 aa11.73□□□□□ -0.53
USP11-207ENST00000478596 IGHV1-69DA0A0B4J2H0 117 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 LCE6AA0A183 80 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 NAPSAO96009 420 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 IGHV1-69P01742 117 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
USP11-207ENST00000478596 MMP9P14780 707 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms