RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TRIM64CA6NLI5 447 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 ZNF780AO75290 641 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-209ENST00000463244 ACTBP60709 375 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 GABPB1Q06547 395 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-209ENST00000463244 DOC2BQ14184 412 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 MINDY2Q8NBR6 621 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 RITA1Q96K30 269 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 ALX4Q9H161 411 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-209ENST00000463244 AMBNQ9NP70 447 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 PARP11Q9NR21 331 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 RCC2Q9P258 522 aaKnown RBP16.04■□□□□ 0.16
CPSF7-209ENST00000463244 TRAPPC2LQ9UL33 140 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 HYDINQ4G0P3 5121 aa16.04■□□□□ 0.16
CPSF7-209ENST00000463244 EI24O14681 340 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 HBZP02008 142 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 GTF2F2P13984 249 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 CNTFRP26992 372 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 SLURP1P55000 103 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 PPP3R1P63098 170 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 RAB40BQ12829 278 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 ZIK1Q3SY52 487 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-209ENST00000463244 SLC22A6Q4U2R8 563 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 C6orf183Q5T699 404 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 GAPTQ8N292 157 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 PRR18Q8N4B5 295 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 OR6Q1Q8NGQ2 317 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 OR1L1Q8NH94 360 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 TM2D3Q9BRN9 247 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 ANKRD60Q9BZ19 345 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 SPACA1Q9HBV2 294 aa16.03■□□□□ 0.16
CPSF7-209ENST00000463244 PLECQ15149 4684 aaKnown RBP16.02■□□□□ 0.16
CPSF7-209ENST00000463244 LINC01619G3V211 115 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 BLVRBP30043 206 aaPredicted RBP16.02■□□□□ 0.16
CPSF7-209ENST00000463244 BDKRB2P30411 391 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 ZFAND6Q6FIF0 208 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 XAF1Q6GPH4 301 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 ACSM6Q6P461 480 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 OR4K15Q8NH41 348 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 TOLLIPQ9H0E2 274 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 GHITMQ9H3K2 345 aa16.02■□□□□ 0.16
CPSF7-209ENST00000463244 TNCP24821 2201 aa16.02■□□□□ 0.15
CPSF7-209ENST00000463244 MAGEA13PA6NCF6 341 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 MCRIP1C9JLW8 97 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 NBR2O15453 112 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 C5orf64Q2M2E5 130 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 TRAT1Q6PIZ9 186 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 OR52I1Q8NGK6 324 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 ZNF251Q9BRH9 671 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 TPSG1Q9NRR2 321 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 ETAA1Q9NY74 926 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 GMPPBQ9Y5P6 360 aa16.01■□□□□ 0.15
CPSF7-209ENST00000463244 LIMS3P0CW19 117 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 LIMS4P0CW20 117 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 RCC1P18754 421 aaPredicted RBP16■□□□□ 0.15
CPSF7-209ENST00000463244 ALDH3A2P51648 485 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 ADARB1P78563 741 aaKnown RBP16■□□□□ 0.15
CPSF7-209ENST00000463244 CCDC58Q4VC31 144 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 MORN2Q502X0 79 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 C19orf54Q5BKX5 351 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 RPL22L1Q6P5R6 122 aaKnown RBP16■□□□□ 0.15
CPSF7-209ENST00000463244 ODF3L1Q8IXM7 274 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 RHOXF1Q8NHV9 184 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 ARPC1AQ92747 370 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 ORAI1Q96D31 301 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 Q96MT0 163 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 ZNF184Q99676 751 aaPredicted RBP16■□□□□ 0.15
CPSF7-209ENST00000463244 NABP2Q9BQ15 211 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 ABHD14AQ9BUJ0 271 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 MRPL20Q9BYC9 149 aaKnown RBP16■□□□□ 0.15
CPSF7-209ENST00000463244 EDA2RQ9HAV5 297 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 OR2S2Q9NQN1 319 aa16■□□□□ 0.15
CPSF7-209ENST00000463244 MRPS18AQ9NVS2 196 aaKnown RBP16■□□□□ 0.15
CPSF7-209ENST00000463244 MRPS28Q9Y2Q9 187 aaKnown RBP16■□□□□ 0.15
CPSF7-209ENST00000463244 IGHV4OR15-8A0A075B7B6 117 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 A0A087WW49 117 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 SOX15O60248 233 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 LGALS1P09382 135 aaKnown RBP15.99■□□□□ 0.15
CPSF7-209ENST00000463244 OR8U9P0C7N5 309 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 NDPQ00604 133 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 RIPK1Q13546 671 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 GPR176Q14439 515 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 SRSF7Q16629 238 aaKnown RBP eCLIP15.99■□□□□ 0.15
CPSF7-209ENST00000463244 ECSCRQ19T08 205 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 RAB12Q6IQ22 244 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 LIN54Q6MZP7 749 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 NPBQ8NG41 125 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 TAF9BQ9HBM6 251 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 FBXO7Q9Y3I1 522 aa15.99■□□□□ 0.15
CPSF7-209ENST00000463244 LDLRAD4O15165 306 aa15.98■□□□□ 0.15
CPSF7-209ENST00000463244 SC5DO75845 299 aa15.98■□□□□ 0.15
CPSF7-209ENST00000463244 NDUFA3O95167 84 aa15.98■□□□□ 0.15
CPSF7-209ENST00000463244 IGFBP3P17936 291 aaPredicted RBP15.98■□□□□ 0.15
CPSF7-209ENST00000463244 CRIP2P52943 208 aaPredicted RBP15.98■□□□□ 0.15
CPSF7-209ENST00000463244 GNMTQ14749 295 aa15.98■□□□□ 0.15
CPSF7-209ENST00000463244 ISOC1Q96CN7 298 aa15.98■□□□□ 0.15
CPSF7-209ENST00000463244 CST11Q9H112 138 aa15.98■□□□□ 0.15
CPSF7-209ENST00000463244 ERGIC3Q9Y282 383 aa15.98■□□□□ 0.15
CPSF7-209ENST00000463244 A0A1W2PN81 502 aa15.97■□□□□ 0.15
CPSF7-209ENST00000463244 CA11O75493 328 aa15.97■□□□□ 0.15
CPSF7-209ENST00000463244 IGHV4-30-4P0DP06 118 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms