RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 MRPL30Q8TCC3 161 aaKnown RBP13.01□□□□□ -0.33
NCKIPSD-208ENST00000454134 PHYHIPQ92561 330 aa13.01□□□□□ -0.33
NCKIPSD-208ENST00000454134 PHF21AQ96BD5 680 aa13.01□□□□□ -0.33
NCKIPSD-208ENST00000454134 SULT4A1Q9BR01 284 aa13.01□□□□□ -0.33
NCKIPSD-208ENST00000454134 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
NCKIPSD-208ENST00000454134 MBNL3Q9NUK0 354 aaKnown RBP13.01□□□□□ -0.33
NCKIPSD-208ENST00000454134 TPRKBQ9Y3C4 175 aa13.01□□□□□ -0.33
NCKIPSD-208ENST00000454134 PF4P02776 101 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 UBBP0CG47 229 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 HSMCR30P0CW71 290 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 MYF6P23409 242 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 CHATP28329 748 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 TMEM30BQ3MIR4 351 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 Q3ZCU0 254 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 TRAT1Q6PIZ9 186 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 C6orf201Q7Z4U5 140 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 SLC35E3Q7Z769 313 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 TGIF2LXQ8IUE1 241 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 Q8N6K4 173 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 OR2T10Q8NGZ9 312 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 UFD1Q92890 307 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 NEDD4LQ96PU5 975 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 FAAP24Q9BTP7 215 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 DUSP21Q9H596 190 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 OR2S2Q9NQN1 319 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 KCNIP1Q9NZI2 227 aa13□□□□□ -0.33
NCKIPSD-208ENST00000454134 IGHG2P01859 326 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 UCHL1P09936 223 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 HTR2CP28335 458 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 CD1BP29016 333 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 PPP1CCP36873 323 aaKnown RBP12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 ZNF137PP52743 207 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 RPS25P62851 125 aaKnown RBP12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 RPS27AP62979 156 aaKnown RBP12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 UNC119Q13432 240 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 MORN2Q502X0 79 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 Q8N9W7 124 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 WFDC9Q8NEX5 89 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 CHPT1Q8WUD6 406 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 NICN1Q9BSH3 213 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 TMEM59Q9BXS4 323 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 CCDC90BQ9GZT6 254 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 PLSCR3Q9NRY6 295 aa12.99□□□□□ -0.33
NCKIPSD-208ENST00000454134 SLC22A1O15245 554 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 RGS10O43665 173 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 MOSP00540 346 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 MAP2K4P45985 399 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 QRFPP83859 136 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 P2RY14Q15391 338 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 TMEM91Q6ZNR0 172 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 Q6ZPA2 131 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 C18orf65Q6ZTR6 163 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 GFI1Q99684 422 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 ANKRD60Q9BZ19 345 aa12.98□□□□□ -0.33
NCKIPSD-208ENST00000454134 A0A0A6YYD4 124 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 TMEM14DPA8MWL7 114 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 CD37P11049 281 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 CRHBPP24387 322 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 GPR12P47775 334 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 F2RL1P55085 397 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 TPBGQ13641 420 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 FOXB2Q5VYV0 432 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 FOXRED2Q8IWF2 684 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 STPG2Q8N412 459 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 KCNG3Q8TAE7 436 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 S1PR3Q99500 378 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 TM2D1Q9BX74 207 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 ABCG5Q9H222 651 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 LIN7CQ9NUP9 197 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 NECAP2Q9NVZ3 263 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 JPT1Q9UK76 154 aa12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 AK6Q9Y3D8 172 aaKnown RBP12.97□□□□□ -0.33
NCKIPSD-208ENST00000454134 ERICH4A6NGS2 130 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 TXNL1O43396 289 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 LANCL1O43813 399 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 BPNT1O95861 308 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 BLVRBP30043 206 aaPredicted RBP12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 RPL23AP62750 156 aaKnown RBP12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 STEAP3Q658P3 488 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 IZUMO2Q6UXV1 221 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 OR2W3Q7Z3T1 314 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 REC114Q7Z4M0 266 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 ZNF554Q86TJ5 538 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 ODF3L1Q8IXM7 274 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 OR6M1Q8NGM8 313 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 GALMQ96C23 342 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 PLGRKTQ9HBL7 147 aa12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 AURKAIP1Q9NWT8 199 aaPredicted RBP12.96□□□□□ -0.33
NCKIPSD-208ENST00000454134 NUDT19A8MXV4 375 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 AP4M1O00189 453 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 SOCS1O15524 211 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 CPEP16870 476 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 SLC35B1P78383 322 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 HTD2P86397 168 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 FABP5Q01469 135 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 MLLT11Q13015 90 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 LSAMPQ13449 338 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 HMGN3Q15651 99 aa12.95□□□□□ -0.34
NCKIPSD-208ENST00000454134 ETV3LQ6ZN32 361 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms