RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 GATAD1Q8WUU5 269 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 NEIL1Q96FI4 390 aaPredicted RBP13.73□□□□□ -0.21
SIK3-205ENST00000446921 PXMP4Q9Y6I8 212 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 RP1P56715 2156 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.73□□□□□ -0.21
SIK3-205ENST00000446921 CCL15-CCL14A0A0B4J2E2 113 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 HCRTR1O43613 425 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 LCN2P80188 198 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 PDCD1Q15116 288 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 NSDHLQ15738 373 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 METRNLQ641Q3 311 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 OR2M3Q8NG83 312 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 FAM222BQ8WU58 562 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 GUCD1Q96NT3 240 aa13.73□□□□□ -0.21
SIK3-205ENST00000446921 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
SIK3-205ENST00000446921 SELPP16109 830 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 PRSS41Q7RTY9 318 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 PRR22Q8IZ63 422 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 BATF2Q8N1L9 274 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 ZNF835Q9Y2P0 537 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 PHF3Q92576 2039 aaKnown RBP13.72□□□□□ -0.21
SIK3-205ENST00000446921 UBE2L5PA0A1B0GUS4 154 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 CEACAM18A8MTB9 384 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 C1QTNF9BB2RNN3 333 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 CLDN1O95832 211 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 CFPP27918 469 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 SLC35B1P78383 322 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 DLX2Q07687 328 aaPredicted RBP13.72□□□□□ -0.21
SIK3-205ENST00000446921 SPANXN5Q5MJ07 72 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 DPF1Q92782 380 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 HOXB13Q92826 284 aaPredicted RBP13.72□□□□□ -0.21
SIK3-205ENST00000446921 WDR61Q9GZS3 305 aaKnown RBP13.72□□□□□ -0.21
SIK3-205ENST00000446921 RNF115Q9Y4L5 304 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 TICRRQ7Z2Z1 1910 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 IGKV1D-42A0A075B6H8 117 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 C3orf85A0A1B0GTC6 90 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 SPINT1O43278 529 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 SRPXP78539 464 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 PRSS57Q6UWY2 283 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
SIK3-205ENST00000446921 OR2Z1Q8NG97 314 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 NXF5Q9H1B4 397 aaKnown RBP13.72□□□□□ -0.21
SIK3-205ENST00000446921 HIF1ANQ9NWT6 349 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 UTRNP46939 3433 aa13.72□□□□□ -0.21
SIK3-205ENST00000446921 EOMESO95936 686 aa13.71□□□□□ -0.21
SIK3-205ENST00000446921 ZNF133P52736 654 aaPredicted RBP13.71□□□□□ -0.21
SIK3-205ENST00000446921 ZNF442Q9H7R0 627 aa13.71□□□□□ -0.21
SIK3-205ENST00000446921 TMEM38BQ9NVV0 291 aa13.71□□□□□ -0.21
SIK3-205ENST00000446921 C1QTNF9P0C862 333 aa13.71□□□□□ -0.21
SIK3-205ENST00000446921 OTX1P32242 354 aaPredicted RBP13.71□□□□□ -0.21
SIK3-205ENST00000446921 GPX7Q96SL4 187 aaPredicted RBP13.71□□□□□ -0.21
SIK3-205ENST00000446921 ROM1Q03395 351 aa13.71□□□□□ -0.22
SIK3-205ENST00000446921 ANGPTL7O43827 346 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 RPS16P62249 146 aaKnown RBP13.7□□□□□ -0.22
SIK3-205ENST00000446921 PSG6Q00889 435 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 SRSF7Q16629 238 aaKnown RBP eCLIP13.7□□□□□ -0.22
SIK3-205ENST00000446921 C9orf40Q8IXQ3 194 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 C11orf40Q8WZ69 217 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 ZNF479Q96JC4 524 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 TMEM74BQ9NUR3 256 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 HSBP1O75506 76 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 C8AP07357 584 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 HNRNPA1L2Q32P51 320 aaKnown RBP13.7□□□□□ -0.22
SIK3-205ENST00000446921 EMC6Q9BV81 110 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 C11orf94C9JXX5 98 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 PRTGQ2VWP7 1150 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 C1QL2Q7Z5L3 287 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 RAB37Q96AX2 223 aa13.7□□□□□ -0.22
SIK3-205ENST00000446921 THAP10Q9P2Z0 257 aaPredicted RBP13.7□□□□□ -0.22
SIK3-205ENST00000446921 MUC21A0A0G2JKD1 596 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 MUC21A0A140T8X8 626 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 NKX2-2O95096 273 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 KISS1Q15726 138 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 MUC21Q5SSG8 566 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 PLCXD3Q63HM9 321 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 FAM71F2Q6NXP2 309 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 C12orf54Q6X4T0 127 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 MRPL21Q7Z2W9 205 aaKnown RBP13.69□□□□□ -0.22
SIK3-205ENST00000446921 C8orf44Q96CB5 159 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 NUDT22Q9BRQ3 303 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 ESPL1Q14674 2120 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 SEC16AO15027 2179 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 DENND4CQ5VZ89 1909 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 NDUFB4O95168 129 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 NTSR1P30989 418 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 QRFPP83859 136 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 IZUMO4Q1ZYL8 232 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 SMIM20Q8N5G0 67 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 TMEM52Q8NDY8 209 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 PPIAL4CA0A0B4J2A2 164 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 HRKO00198 91 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 PPIAL4GP0DN37 164 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 HBG1P69891 147 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 HBG2P69892 147 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 LRRC10Q5BKY1 277 aa13.69□□□□□ -0.22
SIK3-205ENST00000446921 CARD17Q5XLA6 110 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms