RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 NKAIN3Q8N8D7 197 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 THRSPQ92748 146 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 DUX3Q96PT4 197 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 TAF9BQ9HBM6 251 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 KCNIP1Q9NZI2 227 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 CCL24O00175 119 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 SC5DO75845 299 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 MAPK3P27361 379 aaPredicted RBP16.53■□□□□ 0.24
VSX1-206ENST00000444511 VHLP40337 213 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 RCN1Q15293 331 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 VAX1Q5SQQ9 334 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 STEAP3Q658P3 488 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 TFAP2CQ92754 450 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 RAX2Q96IS3 184 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 Q96M66 194 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 UQCC2Q9BRT2 126 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 OR2S2Q9NQN1 319 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 ZMAT5Q9UDW3 170 aaKnown RBP16.53■□□□□ 0.24
VSX1-206ENST00000444511 PSORS1C1Q9UIG5 152 aa16.53■□□□□ 0.24
VSX1-206ENST00000444511 PDCD6O75340 191 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 CD1AP06126 327 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 GNAO1P09471 354 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 SOX6P35712 828 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 FOXE3Q13461 319 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 LCNL1Q6ZST4 164 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 LYPD6Q86Y78 171 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 FAM71E2Q8N5Q1 922 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 FAM46BQ96A09 425 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 HSPB9Q9BQS6 159 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 DCLRE1BQ9H816 532 aa16.52■□□□□ 0.24
VSX1-206ENST00000444511 H0YHG0 523 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 LANCL1O43813 399 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 ELANEP08246 267 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 VDAC1P21796 283 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 F2RL1P55085 397 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 GP2P55259 537 aaKnown RBP16.51■□□□□ 0.23
VSX1-206ENST00000444511 CD69Q07108 199 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 MORN2Q502X0 79 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 SIGIRRQ6IA17 410 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 LAIR2Q6ISS4 152 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 BPIFB6Q8NFQ5 453 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 OR8U1Q8NH10 309 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 RBMXL1Q96E39 390 aaKnown RBP16.51■□□□□ 0.23
VSX1-206ENST00000444511 CST11Q9H112 138 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 PLCXD1Q9NUJ7 323 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
VSX1-206ENST00000444511 GHRLQ9UBU3 117 aa16.51■□□□□ 0.23
VSX1-206ENST00000444511 LSAMPQ13449 338 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 DCTN2Q13561 401 aaKnown RBP16.5■□□□□ 0.23
VSX1-206ENST00000444511 GNMTQ14749 295 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 DEFB136Q30KP8 78 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 NKAPLQ5M9Q1 402 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 ZNF554Q86TJ5 538 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 NANOGP1Q8N7R0 232 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 OR52L2PQ8NGH6 319 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 ABHD14AQ9BUJ0 271 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 JPT1Q9UK76 154 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 ERGIC3Q9Y282 383 aa16.5■□□□□ 0.23
VSX1-206ENST00000444511 IGHG4P01861 327 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 PPP1CCP36873 323 aaKnown RBP16.49■□□□□ 0.23
VSX1-206ENST00000444511 CDX1P47902 265 aaPredicted RBP16.49■□□□□ 0.23
VSX1-206ENST00000444511 DGCR2P98153 550 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 KIR2DS1Q14954 304 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 MMDQ15546 238 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 C11orf87Q6NUJ2 197 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 RNF152Q8N8N0 203 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 MRPL30Q8TCC3 161 aaKnown RBP16.49■□□□□ 0.23
VSX1-206ENST00000444511 CYYR1Q96J86 154 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 NEDD4LQ96PU5 975 aa16.49■□□□□ 0.23
VSX1-206ENST00000444511 ZNF107Q9UII5 783 aaPredicted RBP16.49■□□□□ 0.23
VSX1-206ENST00000444511 UBBP0CG47 229 aa16.48■□□□□ 0.23
VSX1-206ENST00000444511 OR5H8P0DN80 308 aa16.48■□□□□ 0.23
VSX1-206ENST00000444511 SLC2A2P11168 524 aaPredicted RBP16.48■□□□□ 0.23
VSX1-206ENST00000444511 MYF6P23409 242 aa16.48■□□□□ 0.23
VSX1-206ENST00000444511 CFHR3Q02985 330 aa16.48■□□□□ 0.23
VSX1-206ENST00000444511 OR5M8Q8NGP6 311 aa16.48■□□□□ 0.23
VSX1-206ENST00000444511 FBLIM1Q8WUP2 373 aa16.48■□□□□ 0.23
VSX1-206ENST00000444511 RGS11O94810 467 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 IGF1P05019 195 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 HTD2P86397 168 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 GABPB1Q06547 395 aaPredicted RBP16.47■□□□□ 0.23
VSX1-206ENST00000444511 INSL4Q14641 139 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 ACSM3Q53FZ2 586 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 C5orf24Q7Z6I8 188 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 GALMQ96C23 342 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 KCTD7Q96MP8 289 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 B9D2Q9BPU9 175 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 ZNF580Q9UK33 172 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 LRRC42Q9Y546 428 aa16.47■□□□□ 0.23
VSX1-206ENST00000444511 ACTBP60709 375 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 OGFRL1Q5TC84 451 aaPredicted RBP16.46■□□□□ 0.23
VSX1-206ENST00000444511 GLT8D1Q68CQ7 371 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 MS4A15Q8N5U1 240 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 C4orf3Q8WVX3 66 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 ZNF251Q9BRH9 671 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 MND1Q9BWT6 205 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 MRPL20Q9BYC9 149 aaKnown RBP16.46■□□□□ 0.23
VSX1-206ENST00000444511 FKBP14Q9NWM8 211 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 ABRACLQ9P1F3 81 aa16.46■□□□□ 0.23
VSX1-206ENST00000444511 YPEL1O60688 119 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms