RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 RRP8O43159 456 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR2F2O95006 317 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TNFSF15O95150 251 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 SFT2D2O95562 160 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ACTL6AO96019 429 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 NRASP01111 189 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TGFAP01135 160 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MMP7P09237 267 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PATE4P0C8F1 98 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM106CPP0CH98 169 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUX4L2P0CJ85 424 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUX4L3P0CJ86 424 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUX4L4P0CJ87 422 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUX4L5P0CJ88 424 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUX4L6P0CJ89 424 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUX4L7P0CJ90 424 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RRASP10301 218 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 COX5BP10606 129 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF708P17019 499 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 GABRR1P24046 479 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ACKR3P25106 362 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARR3P36575 388 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RFC3P40938 356 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PMELP40967 661 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MAGEA5P43359 124 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RBP2P50120 134 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 AP2S1P53680 142 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARPC4P59998 168 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 UBA52P62987 128 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM3AP98173 230 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF92Q03936 586 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RELQ04864 619 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF415Q09FC8 603 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR2F1Q13607 317 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC10A1Q14973 349 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 AANATQ16613 207 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM128Q5BJH2 165 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DMRTC1Q5HYR2 192 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PABPC1L2AQ5JQF8 200 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PLCXD3Q63HM9 321 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM42Q69YG0 159 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF660Q6AZW8 331 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 GFRALQ6UXV0 394 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ACOT7LQ6ZUV0 252 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF546Q86UE3 836 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RTN4RL2Q86UN3 420 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 LHFPL1Q86WI0 220 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MMD2Q8IY49 270 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 KCNRGQ8N5I3 272 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM251Q8N6I4 163 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZSCAN4Q8NAM6 433 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PXT1Q8NFP0 134 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5AP2Q8NGF4 316 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR13G1Q8NGZ3 307 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR2AE1Q8NHA4 323 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 COQ8AQ8NI60 647 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 CASTOR1Q8WTX7 329 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ABHD3Q8WU67 409 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PCNPQ8WW12 178 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PIGCQ92535 297 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 EMG1Q92979 244 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MRGPRFQ96AM1 343 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MRPS24Q96EL2 167 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 SEC22AQ96IW7 307 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 SIGLEC12Q96PQ1 595 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ALKBH3Q96Q83 286 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RTBDNQ9BSG5 229 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 HES7Q9BYE0 225 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TTTY12Q9BZ98 90 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 NMES1Q9C002 83 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RNF122Q9H9V4 155 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 FN3KRPQ9HA64 309 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 CALHM2Q9HA72 323 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM9BQ9NQ34 198 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 GSN-AS1Q9NRJ2 163 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MED9Q9NWA0 146 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RDH8Q9NYR8 311 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 EHFQ9NZC4 300 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 IL36GQ9NZH8 169 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 DUX4Q9UBX2 424 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF230Q9UIE0 474 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ATPIF1Q9UII2 106 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MCTS1Q9ULC4 181 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TNFSF18Q9UNG2 199 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 C14orf166Q9Y224 244 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 FOXA2Q9Y261 457 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 KLF13Q9Y2Y9 288 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR2W1Q9Y3N9 320 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 R4GN57 208 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 SPTBP11277 2137 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TP53BP1Q12888 1972 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 MYO9BQ13459 2157 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 IGKV1-27A0A075B6S5 117 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 IGKV1D-8A0A087WSZ0 117 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 A0A087X0K7 114 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 MED19A0JLT2 244 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARGFXA6NJG6 315 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 C15orf62A8K5M9 175 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF850A8MQ14 1090 aa2.86□□□□□ -1.95
HMGB3P11-201ENST00000440127 I3L521 148 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms