RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 PAX5Q02548 391 aa18.35■□□□□ 0.53
VSX1-205ENST00000429762 C11orf71Q6IPW1 123 aa18.35■□□□□ 0.53
VSX1-205ENST00000429762 TBC1D26Q86UD7 250 aa18.35■□□□□ 0.53
VSX1-205ENST00000429762 LURAP1Q96LR2 239 aa18.35■□□□□ 0.53
VSX1-205ENST00000429762 C5orf51A6NDU8 294 aa18.34■□□□□ 0.53
VSX1-205ENST00000429762 GPR31O00270 319 aa18.34■□□□□ 0.53
VSX1-205ENST00000429762 OR8U9P0C7N5 309 aa18.34■□□□□ 0.53
VSX1-205ENST00000429762 ERP29P30040 261 aaKnown RBP18.34■□□□□ 0.53
VSX1-205ENST00000429762 MEX3BQ6ZN04 569 aaKnown RBP18.34■□□□□ 0.53
VSX1-205ENST00000429762 OR8U1Q8NH10 309 aa18.34■□□□□ 0.53
VSX1-205ENST00000429762 TP53RKQ96S44 253 aa18.34■□□□□ 0.53
VSX1-205ENST00000429762 RANBP3Q9H6Z4 567 aaPredicted RBP18.34■□□□□ 0.53
VSX1-205ENST00000429762 KCNS2Q9ULS6 477 aa18.34■□□□□ 0.53
VSX1-205ENST00000429762 RBM7Q9Y580 266 aaKnown RBP18.34■□□□□ 0.53
VSX1-205ENST00000429762 PHF1O43189 567 aaPredicted RBP18.33■□□□□ 0.53
VSX1-205ENST00000429762 NDUFB7P17568 137 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 OMGP23515 440 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 HFEQ30201 348 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 LAMTOR1Q6IAA8 161 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 FAM219AQ8IW50 185 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 CCDC71LQ8N9Z2 235 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 OR5D13Q8NGL4 314 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 HYLS1Q96M11 299 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 RNF150Q9ULK6 438 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 LAMP3Q9UQV4 416 aa18.33■□□□□ 0.53
VSX1-205ENST00000429762 MPPED1O15442 326 aa18.33■□□□□ 0.52
VSX1-205ENST00000429762 LUMP51884 338 aaPredicted RBP18.33■□□□□ 0.52
VSX1-205ENST00000429762 TMEM187Q14656 261 aa18.33■□□□□ 0.52
VSX1-205ENST00000429762 LPCAT3Q6P1A2 487 aa18.33■□□□□ 0.52
VSX1-205ENST00000429762 DCHS2Q6V1P9 2916 aa18.33■□□□□ 0.52
VSX1-205ENST00000429762 TCF23Q7RTU1 214 aa18.33■□□□□ 0.52
VSX1-205ENST00000429762 OR2S2Q9NQN1 319 aa18.33■□□□□ 0.52
VSX1-205ENST00000429762 ADAM20O43506 726 aa18.32■□□□□ 0.52
VSX1-205ENST00000429762 DANCRP0C864 163 aa18.32■□□□□ 0.52
VSX1-205ENST00000429762 LRRC37A5PQ49AS3 106 aa18.32■□□□□ 0.52
VSX1-205ENST00000429762 C14orf79Q96F83 325 aa18.32■□□□□ 0.52
VSX1-205ENST00000429762 TMEM246Q9BRR3 403 aa18.32■□□□□ 0.52
VSX1-205ENST00000429762 METTL8Q9H825 291 aaKnown RBP18.32■□□□□ 0.52
VSX1-205ENST00000429762 DSCAML1Q8TD84 2053 aa18.32■□□□□ 0.52
VSX1-205ENST00000429762 A0A0B4J2A0 478 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 SPINT2O43291 252 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 IGLV2-14P01704 120 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 IGHV3-7P01780 117 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 UTF1Q5T230 341 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 C9orf62Q8N4C0 152 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 CTSZQ9UBR2 303 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 SLC25A10Q9UBX3 287 aaPredicted RBP18.31■□□□□ 0.52
VSX1-205ENST00000429762 SHPKQ9UHJ6 478 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 KCNIP3Q9Y2W7 256 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 ZNF462Q96JM2 2506 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 C3orf85A0A1B0GTC6 90 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 HLA-GP17693 338 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 AVPI1Q5T686 147 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 LHFPL5Q8TAF8 219 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 CALYQ9NYX4 217 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 HSPB11Q9Y547 144 aa18.31■□□□□ 0.52
VSX1-205ENST00000429762 TRAV14DV4A0A0A6YYC5 116 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 A6NNC1 897 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 TNFRSF13BO14836 293 aaPredicted RBP18.3■□□□□ 0.52
VSX1-205ENST00000429762 GSG1LQ6UXU4 331 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 GLYATL2Q8WU03 294 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 NINJ1Q92982 152 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 GALNT14Q96FL9 552 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 OR10C1Q96KK4 312 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 TRAF4Q9BUZ4 470 aaPredicted RBP18.3■□□□□ 0.52
VSX1-205ENST00000429762 FAM234AQ9H0X4 552 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 FLNCQ14315 2725 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 PGLYRP1O75594 196 aaPredicted RBP18.3■□□□□ 0.52
VSX1-205ENST00000429762 CDKN1AP38936 164 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 RND3P61587 244 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 C17orf58Q2M2W7 97 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 TRAT1Q6PIZ9 186 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 OR51H1Q8NH63 302 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 RAB1BQ9H0U4 201 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 RAB18Q9NP72 206 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 OR6C3Q9NZP0 311 aa18.3■□□□□ 0.52
VSX1-205ENST00000429762 GZMHP20718 246 aa18.29■□□□□ 0.52
VSX1-205ENST00000429762 LIAT1Q6ZQX7 453 aa18.29■□□□□ 0.52
VSX1-205ENST00000429762 FAM185AQ8N0U4 392 aa18.29■□□□□ 0.52
VSX1-205ENST00000429762 LEAP2Q969E1 77 aa18.29■□□□□ 0.52
VSX1-205ENST00000429762 MSI2Q96DH6 328 aaKnown RBP18.29■□□□□ 0.52
VSX1-205ENST00000429762 C5orf30Q96GV9 206 aa18.29■□□□□ 0.52
VSX1-205ENST00000429762 OR2D2Q9H210 308 aa18.29■□□□□ 0.52
VSX1-205ENST00000429762 C19orf12Q9NSK7 152 aa18.29■□□□□ 0.52
VSX1-205ENST00000429762 FXYD6-FXYD2A0A087WZ82 144 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 ST8SIA5O15466 376 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 CR1LQ2VPA4 569 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 DTX2Q86UW9 622 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 CMTM1Q8IZ96 169 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 BVESQ8NE79 360 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 GNG12Q9UBI6 72 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 TRGV10A0A0A0MS01 117 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 RP2O75695 350 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 CGB3P0DN86 165 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 CGB7P0DN87 165 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 SRSF4Q08170 494 aaKnown RBP18.28■□□□□ 0.52
VSX1-205ENST00000429762 GGNBP1Q5YKI7 109 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 LYZL2Q7Z4W2 148 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 DRAM1Q8N682 238 aa18.28■□□□□ 0.52
VSX1-205ENST00000429762 H1FXQ92522 213 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms