RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ZIC4Q8N9L1 334 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 LRRC75AQ8NAA5 344 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 STXBP6Q8NFX7 210 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR5D13Q8NGL4 314 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR5AR1Q8NGP9 310 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 FAM222BQ8WU58 562 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 RNF133Q8WVZ7 376 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 WFDC12Q8WWY7 111 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 RAB1CQ92928 201 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 SCAMP4Q969E2 229 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 PPP1R14AQ96A00 147 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 MSI2Q96DH6 328 aaKnown RBP4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 OR2A5Q96R48 311 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 ABHD14AQ9BUJ0 271 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 PECRQ9BY49 303 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 G6PC2Q9NQR9 355 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 SLC2A4RGQ9NR83 387 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 RPRMQ9NS64 109 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 CLEC5AQ9NY25 188 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 NAT8BQ9UHF3 227 aa4.84□□□□□ -1.63
VTI1BP4-201ENST00000427516 PAPPA2Q9BXP8 1791 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 IGLV1-36A0A0B4J1U3 117 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 KIR2DS1A0A191URI9 304 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A1W2PNV4 684 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 LINC01553A4QN01 128 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 PSMB11A5LHX3 300 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 IGLON5A6NGN9 336 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 LIPT2A6NK58 231 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 C11orf94C9JXX5 98 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 H0Y980 276 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 H3BRM9 83 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 K7EP34 96 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 K7EQM0 130 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 SLC33A1O00400 549 aaPredicted RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 TAX1BP3O14907 124 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 SLC25A17O43808 307 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 SLC16A7O60669 478 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 MPDU1O75352 247 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 SRSF10O75494 262 aaKnown RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 RBMXL2O75526 392 aaKnown RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CLEC3BP05452 202 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 WNT2P09544 360 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 STAG3L2P0CL84 134 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CT45A6P0DMU7 189 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CT45A5P0DMU8 189 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CT45A7P0DMV0 189 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CRYBB3P26998 211 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 KIR2DS4P43632 304 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 LGALS7P47929 136 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 LHX2P50458 406 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 ATP5IP56385 69 aaPredicted RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM50BP56557 158 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 ARF3P61204 181 aaPredicted RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 ARG2P78540 354 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 ARF1P84077 181 aaKnown RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 KIR2DS1Q14954 304 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CT45A1Q5HYN5 189 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 DCAF12Q5T6F0 453 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 AMMECR1LQ6DCA0 310 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 IGF2-ASQ6U949 168 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 ADAMTSL4Q6UY14 1074 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 LCNL1Q6ZST4 164 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM57BQ71RH2 274 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 ATG4DQ86TL0 474 aaPredicted RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 C5orf17Q8NAS9 161 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR10G9Q8NGN4 311 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR2AE1Q8NHA4 323 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CT45A3Q8NHU0 189 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 RERGQ96A58 199 aaPredicted RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 KLHDC7BQ96G42 594 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 C5orf30Q96GV9 206 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CLUHP3Q96NS8 147 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 PTPN18Q99952 460 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 PAAF1Q9BRP4 392 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 TIMM29Q9BSF4 260 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 SPXQ9BT56 116 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM70Q9BUB7 260 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 LRRC61Q9BV99 259 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 PBOV1Q9GZY1 135 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 C11orf1Q9H5F2 150 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 WSB2Q9NYS7 404 aaPredicted RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 CD207Q9UJ71 328 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 MCTS1Q9ULC4 181 aaKnown RBP4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 DAPP1Q9UN19 280 aa4.83□□□□□ -1.64
VTI1BP4-201ENST00000427516 ANAPC1Q9H1A4 1944 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TRAV38-1A0A0B4J264 116 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TRAV34A0A0B4J273 112 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 C7orf71A4D174 169 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A10PA6NDY2 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A18PA6NE21 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A16PA6NEW6 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A8PA6NJQ4 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 SLC22A20A6NK97 555 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A7PA6NKC0 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A22PA8MWA6 464 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms