RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 UBALD1Q8TB05 177 aa7.46□□□□□ -1.22
NUP50-205ENST00000419387 EAF1Q96JC9 268 aaPredicted RBP7.46□□□□□ -1.22
NUP50-205ENST00000419387 DERL3Q96Q80 235 aa7.46□□□□□ -1.22
NUP50-205ENST00000419387 OR14A2Q96R54 314 aa7.46□□□□□ -1.22
NUP50-205ENST00000419387 Q9H521 79 aa7.46□□□□□ -1.22
NUP50-205ENST00000419387 ZFP57Q9NU63 452 aa7.46□□□□□ -1.22
NUP50-205ENST00000419387 ETAA1Q9NY74 926 aa7.46□□□□□ -1.22
NUP50-205ENST00000419387 RCC2Q9P258 522 aaKnown RBP7.46□□□□□ -1.22
NUP50-205ENST00000419387 TRAPPC2LQ9UL33 140 aa7.46□□□□□ -1.22
NUP50-205ENST00000419387 IGHV3-72A0A0B4J1Y9 119 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 FAM90A10PA6NDY2 464 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 FAM90A7PA6NKC0 464 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 NCBP2LA6PVI3 153 aaKnown RBP7.45□□□□□ -1.22
NUP50-205ENST00000419387 FAM90A23PA8MXZ1 464 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 SPINT2O43291 252 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 GLAP06280 429 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 CD1BP29016 333 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 RPL23AP62750 156 aaKnown RBP7.45□□□□□ -1.22
NUP50-205ENST00000419387 SLC35B1P78383 322 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 C6orf183Q5T699 404 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 SYT6Q5T7P8 510 aaPredicted RBP7.45□□□□□ -1.22
NUP50-205ENST00000419387 LIPKQ5VXJ0 399 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 AWAT2Q6E213 333 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 RAB12Q6IQ22 244 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 FAM53AQ6NSI3 398 aaPredicted RBP7.45□□□□□ -1.22
NUP50-205ENST00000419387 ZNF773Q6PK81 442 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 CD200R1LQ6Q8B3 271 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 SLC25A48Q6ZT89 311 aaKnown RBP7.45□□□□□ -1.22
NUP50-205ENST00000419387 TGIF2LXQ8IUE1 241 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 FOXRED2Q8IWF2 684 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 IZUMO1Q8IYV9 350 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 GAPTQ8N292 157 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 COMMD1Q8N668 190 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 Q8N6K4 173 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 LINC00482Q8N8I6 264 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 OR51D1Q8NGF3 324 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 OR2T10Q8NGZ9 312 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 OR4K15Q8NH41 348 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 RTN4IP1Q8WWV3 396 aaPredicted RBP7.45□□□□□ -1.22
NUP50-205ENST00000419387 ST6GALNAC6Q969X2 333 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 CCDC90BQ9GZT6 254 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 BANF2Q9H503 90 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 RAB9BQ9NP90 201 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 LINC00527Q9UJ94 153 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 BLOC1S6Q9UL45 172 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 PEX16Q9Y5Y5 336 aa7.45□□□□□ -1.22
NUP50-205ENST00000419387 SHISA3A0PJX4 238 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 LINC01548A6NM66 108 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 C12orf77C9JDV5 145 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 SLC31A2O15432 143 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 CA11O75493 328 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 CRTAPO75718 401 aaPredicted RBP7.44□□□□□ -1.22
NUP50-205ENST00000419387 MPIG6BO95866 241 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 MOSP00540 346 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 HBZP02008 142 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 MGMTP16455 207 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 FUT3P21217 361 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 SLC6A1P30531 599 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 THBS3P49746 956 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 ZNF134P52741 427 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 RPS25P62851 125 aaKnown RBP7.44□□□□□ -1.22
NUP50-205ENST00000419387 FABP5Q01469 135 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 TMEM30BQ3MIR4 351 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 ACSM3Q53FZ2 586 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 CT45A1Q5HYN5 189 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 XP32Q5T750 250 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 TRAT1Q6PIZ9 186 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 ETV3LQ6ZN32 361 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 OR2W3Q7Z3T1 314 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 LRRTM1Q86UE6 522 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 MRPL41Q8IXM3 137 aaKnown RBP7.44□□□□□ -1.22
NUP50-205ENST00000419387 STPG2Q8N412 459 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 PRR18Q8N4B5 295 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 Q8N9W7 124 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 ZNF439Q8NDP4 499 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 TMEM104Q8NE00 496 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 CT45A3Q8NHU0 189 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 THRSPQ92748 146 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 TMEM203Q969S6 136 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 GFI1Q99684 422 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 SELENOIQ9C0D9 397 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 ABCG5Q9H222 651 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 LIN7CQ9NUP9 197 aaKnown RBP7.44□□□□□ -1.22
NUP50-205ENST00000419387 GNG12Q9UBI6 72 aa7.44□□□□□ -1.22
NUP50-205ENST00000419387 UBE2QL1A1L167 161 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 NUDT19A8MXV4 375 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 ZNF736B4DX44 427 aaPredicted RBP7.43□□□□□ -1.22
NUP50-205ENST00000419387 K7EIL1 84 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 AP4M1O00189 453 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 TXNL1O43396 289 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 UCHL1P09936 223 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 RCC1P18754 421 aaPredicted RBP7.43□□□□□ -1.22
NUP50-205ENST00000419387 MAPK3P27361 379 aaPredicted RBP7.43□□□□□ -1.22
NUP50-205ENST00000419387 MYCNOSP40205 109 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 GPR12P47775 334 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 ZNF137PP52743 207 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 KRTAP10-11P60412 298 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 PNLIPRP3Q17RR3 467 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 STEAP3Q658P3 488 aa7.43□□□□□ -1.22
NUP50-205ENST00000419387 SIGIRRQ6IA17 410 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms