RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TANC2Q9HCD6 1990 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGKV1-12A0A0C4DH73 117 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 NKX2-6A6NCS4 301 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 MCRIP1C9JLW8 97 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 F5H5P2 479 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 BOLA2-SMG1P6H3BVE0 249 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ABCD4O14678 606 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 HS3ST1O14792 307 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 GEMIN2O14893 280 aaKnown RBP3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 MLNRO43193 412 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 AKR7A2O43488 359 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 SYNGR1O43759 233 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 SSNA1O43805 119 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 PRAF2O60831 178 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 CA11O75493 328 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 CCNKO75909 580 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 NDUFB6O95139 128 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGKV1D-12P01611 117 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 PMP2P02689 132 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 CD3DP04234 171 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 RLN1P04808 185 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 SFTPBP07988 381 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 MELTFP08582 738 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRAPPC2P0DI81 140 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 TRAPPC2BP0DI82 140 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 IRF2P14316 349 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 FUT3P21217 361 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 GLRA1P23415 457 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 BTCP35070 178 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 HRH1P35367 487 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 GLP1RP43220 463 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 NPBWR2P48146 333 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 GMFBP60983 142 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 TSPAN5P62079 268 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF154Q13106 437 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 SMIM21Q3B7S5 101 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 PAN3Q58A45 887 aaKnown RBP3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMEM255AQ5JRV8 349 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 METTL11BQ5VVY1 283 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 PRAMEF6Q5VXH4 476 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ELP2Q6IA86 826 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR52W1Q6IF63 320 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ASCL4Q6XD76 172 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 C6orf201Q7Z4U5 140 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 TMED4Q7Z7H5 227 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 RTN4RL2Q86UN3 420 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM58AQ8N1B3 248 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 FAM89BQ8N5H3 189 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ARRDC1Q8N5I2 433 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 GVQW1Q8N7I0 195 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 BEST4Q8NFU0 473 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR2Z1Q8NG97 314 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR4S1Q8NGB4 309 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR51S1Q8NGJ8 323 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR4K15Q8NH41 348 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 CCDC107Q8WV48 283 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 MAFIPQ8WZ33 124 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 RNASE6Q93091 150 aaKnown RBP3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ELMOD3Q96FG2 381 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF488Q96MN9 340 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 SLC6A7Q99884 636 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 MARVELD1Q9BSK0 173 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 PCGF1Q9BSM1 259 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ST6GALNAC5Q9BVH7 336 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 BEX2Q9BXY8 128 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 EGLN1Q9GZT9 426 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 FGF23Q9GZV9 251 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 CHST6Q9GZX3 395 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 MED28Q9H204 178 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 PPA2Q9H2U2 334 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR51I2Q9H344 312 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 RHOFQ9HBH0 211 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 BEX1Q9HBH7 125 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZNF286AQ9HBT8 521 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 SPACA1Q9HBV2 294 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 DYNLRB1Q9NP97 96 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 KCNJ16Q9NPI9 418 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 C12orf4Q9NQ89 552 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 EHFQ9NZC4 300 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 OR14J1Q9UGF5 321 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 AK3Q9UIJ7 227 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ELF5Q9UKW6 265 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 ALPK2Q86TB3 2170 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 CNTRLQ7Z7A1 2325 aa3.15□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGLV5-45A0A087WSX0 123 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 IGHV3-64DA0A0J9YX35 117 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 C7orf66A4D0T2 115 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 TUBAL3A6NHL2 446 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 ZSCAN5BA6NJL1 495 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 FOXI3A8MTJ6 420 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 A8MV72 311 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 H0YL77 283 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 M0R233 179 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SIRPB1O00241 398 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CDIPTO14735 213 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SH2D1BO14796 132 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 DEGS1O15121 323 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 SSX5O60225 188 aa3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 CREBL2O60519 120 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P20-201ENST00000417997 RHBDL1O75783 438 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms