RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SLC2A2P11168 524 aaPredicted RBP11.55□□□□□ -0.56
RPS28-201ENST00000417088 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
RPS28-201ENST00000417088 ADARB1P78563 741 aaKnown RBP11.55□□□□□ -0.56
RPS28-201ENST00000417088 LSAMPQ13449 338 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 KIAA0141Q14154 515 aaPredicted RBP11.55□□□□□ -0.56
RPS28-201ENST00000417088 ZNF260Q3ZCT1 412 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 Q499Y3 187 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 STEAP3Q658P3 488 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 C10orf67Q8IYJ2 551 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 PQLC1Q8N2U9 271 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 MRPS24Q96EL2 167 aaKnown RBP11.55□□□□□ -0.56
RPS28-201ENST00000417088 PGLYRP3Q96LB9 341 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 ASCL2Q99929 193 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 KLK15Q9H2R5 256 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 DIMT1Q9UNQ2 313 aaKnown RBP11.55□□□□□ -0.56
RPS28-201ENST00000417088 EXOSC1Q9Y3B2 195 aaKnown RBP11.55□□□□□ -0.56
RPS28-201ENST00000417088 PEX16Q9Y5Y5 336 aa11.55□□□□□ -0.56
RPS28-201ENST00000417088 TRBV5-7A0A0A0MS05 114 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 IRGMA1A4Y4 181 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 SC5DO75845 299 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 OR5H8P0DN80 308 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 FSTP19883 344 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 MYF6P23409 242 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 MMDQ15546 238 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 MORN2Q502X0 79 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 YIF1BQ5BJH7 314 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 ASPHD1Q5U4P2 390 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 TRAT1Q6PIZ9 186 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 C5orf24Q7Z6I8 188 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 JAGN1Q8N5M9 183 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 ZFP41Q8N8Y5 198 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 ZNF485Q8NCK3 441 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 ZNF555Q8NEP9 628 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 RITA1Q96K30 269 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 RDH12Q96NR8 316 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 CHCHD6Q9BRQ6 235 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 BANF2Q9H503 90 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 GNB4Q9HAV0 340 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 TAF9BQ9HBM6 251 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 WSB1Q9Y6I7 421 aa11.54□□□□□ -0.56
RPS28-201ENST00000417088 A0A1W2PPK0 400 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 UBE2QL1A1L167 161 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 FAM90A10PA6NDY2 464 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 FAM90A7PA6NKC0 464 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 FAM90A23PA8MXZ1 464 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 G3V318 75 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 I3L521 148 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 CA11O75493 328 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 MYL12AP19105 171 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 GNMTQ14749 295 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 SIGIRRQ6IA17 410 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 LYPD6Q86Y78 171 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 UBE2E2Q96LR5 201 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 OR14A2Q96R54 314 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 SELENOIQ9C0D9 397 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 OR2S2Q9NQN1 319 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 MBNL3Q9NUK0 354 aaKnown RBP11.53□□□□□ -0.56
RPS28-201ENST00000417088 SMPD3Q9NY59 655 aaPredicted RBP11.53□□□□□ -0.56
RPS28-201ENST00000417088 ZNF256Q9Y2P7 627 aaPredicted RBP11.53□□□□□ -0.56
RPS28-201ENST00000417088 SORL1Q92673 2214 aa11.53□□□□□ -0.56
RPS28-201ENST00000417088 HUWE1Q7Z6Z7 4374 aaKnown RBP11.53□□□□□ -0.56
RPS28-201ENST00000417088 IGHV7-81A0A0B4J1V7 117 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 ATP6V0E1O15342 81 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 IGLV1-40P01703 118 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 GLAP06280 429 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 MGMTP16455 207 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 FUT3P21217 361 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 CNTFRP26992 372 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 PPP1CCP36873 323 aaKnown RBP11.52□□□□□ -0.57
RPS28-201ENST00000417088 ACTBP60709 375 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 RUNX1Q01196 453 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 AWAT2Q6E213 333 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 TMEM65Q6PI78 240 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 CDH26Q8IXH8 852 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 ODF3L1Q8IXM7 274 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 TMEM80Q96HE8 168 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 Q96M66 194 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 OR5B12Q96R08 314 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 NABP2Q9BQ15 211 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 ABHD14AQ9BUJ0 271 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.57
RPS28-201ENST00000417088 OR51J1Q9H342 316 aa11.52□□□□□ -0.57
RPS28-201ENST00000417088 CRTAPO75718 401 aaPredicted RBP11.51□□□□□ -0.57
RPS28-201ENST00000417088 HLA-DRB1P01911 266 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 MAS1P04201 325 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 OR8U8P0C7N1 319 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 CHATP28329 748 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 INSL3P51460 131 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 GNB1P62873 340 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 ZNF616Q08AN1 781 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 MED21Q13503 144 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 ZNF554Q86TJ5 538 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
RPS28-201ENST00000417088 DERL3Q96Q80 235 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 ZNF251Q9BRH9 671 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms