RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ERVS71-1P61550 626 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 PPP1CBP62140 327 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 BTG1P62324 171 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 BSPH1Q075Z2 132 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 C15orf32Q32M92 178 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 HSD17B12Q53GQ0 312 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 PGAP1Q75T13 922 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 TPRA1Q86W33 373 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 SERPINA12Q8IW75 414 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 OR5AS1Q8N127 324 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 LINC00612Q8N6U2 182 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 OR56B2PQ8NGI1 322 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 OR51A2Q8NGJ7 313 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 OR5L1Q8NGL2 311 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 LINC01560Q8TB33 94 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 SLC25A40Q8TBP6 338 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 KLF14Q8TD94 323 aaPredicted RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 TSEN15Q8WW01 171 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 SLC25A46Q96AG3 418 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 FGGYQ96C11 551 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 HAVCR1Q96D42 359 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 SLC30A2Q9BRI3 323 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 OR2J1Q9GZK6 312 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 CHST5Q9GZS9 411 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 SLIRPQ9GZT3 109 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 FGF23Q9GZV9 251 aaPredicted RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 NXF2Q9GZY0 626 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 ZNF442Q9H7R0 627 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 TAS2R4Q9NYW5 299 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 PTTG3PQ9NZH4 202 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 THYN1Q9P016 225 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 CCDC59Q9P031 241 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 EIF3KQ9UBQ5 218 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 SPATA2Q9UM82 520 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 N6AMT1Q9Y5N5 214 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 ADGRG4Q8IZF6 3080 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 MYO18BQ8IUG5 2567 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 AKAP6Q13023 2319 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 A0A075B6Q4 140 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 ZNF816-ZNF321PA0A0X1KG74 233 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 A6NIN4 97 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 IFITM5A6NNB3 132 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 CD300LBA8K4G0 201 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 ABCD4O14678 606 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 TXNL1O43396 289 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 SULT1B1O43704 296 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 GMDSO60547 372 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 NOL3O60936 208 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 CST4P01036 141 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 ALDOBP05062 364 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 CD2P06729 351 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 ZNF250P15622 560 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 ATF1P18846 271 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 RAB3AP20336 220 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 RAB3BP20337 219 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 MYL9P24844 172 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 MPV17P39210 176 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 CAV3P56539 151 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 MXD1Q05195 221 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 RIPPLY1Q0D2K3 151 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 PSG7Q13046 419 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 DYNC1I2Q13409 638 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 SNTB2Q13425 540 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 UBE2V2Q15819 145 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 ALKBH6Q3KRA9 238 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 BEX5Q5H9J7 111 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 C1orf100Q5SVJ3 147 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 CLVS2Q5SYC1 327 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 SPATA46Q5T0L3 261 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 C9orf66Q5T8R8 295 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 OR2T2Q6IF00 324 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 SFXN4Q6P4A7 337 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 C11orf88Q6PI97 169 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 Q6ZR03 302 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 TMUB2Q71RG4 321 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 MRPL21Q7Z2W9 205 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 SLC25A42Q86VD7 318 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 CDH26Q8IXH8 852 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 UXS1Q8NBZ7 420 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 OR1M1Q8NGA1 313 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 OR5D14Q8NGL3 314 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 OR13C9Q8NGT0 318 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 OR6F1Q8NGZ6 308 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 PP6455Q8WZ26 134 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 MRPL24Q96A35 216 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 CMBLQ96DG6 245 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 DCUN1D5Q9BTE7 237 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 OR51B6Q9H340 312 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 NGBQ9NPG2 151 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 TMEM138Q9NPI0 162 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 CA10Q9NS85 328 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 MYEF2Q9P2K5 600 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 KCNN3Q9UGI6 736 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 PURGQ9UJV8 347 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 PIGLQ9Y2B2 252 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 AK6Q9Y3D8 172 aaKnown RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 KLF2Q9Y5W3 355 aaPredicted RBP3.3□□□□□ -1.88
CLK1-203ENST00000409769 V9GY05 133 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 DYSFO75923 2080 aa3.3□□□□□ -1.88
CLK1-203ENST00000409769 IGKV1-27A0A075B6S5 117 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms