RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RBM7Q9Y580 266 aaKnown RBP3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 MIA2Q96PC5 1412 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SPEF2Q9C093 1822 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SIGLEC1Q9BZZ2 1709 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 TSPOAP1O95153 1857 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGKV6D-21A0A0A0MT36 114 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 TRAV19A0A0A6YYK7 116 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 KIR2DS1A0A191URI9 304 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 SMIM31A0A1B0GVY4 71 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR5H14A6NHG9 310 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 ENTPD6O75354 484 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 HLA-AP01891 365 aaKnown RBP3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 C1QBP02746 253 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 MT-ND4P03905 459 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 ISG15P05161 165 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR56A5P0C7T3 313 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 METTL15P1P0C7V9 234 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 C8orf88P0DMB2 117 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF823P16415 610 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 TAC1P20366 129 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 S100GP29377 79 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 GCLMP48507 274 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF133P52736 654 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 TCL1AP56279 114 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 KLF3P57682 345 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 MTPNP58546 118 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 IFITM3Q01628 133 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 EMX2Q04743 252 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 CDK10Q15131 360 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 C4orf26Q17RF5 130 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 TBC1D28Q2M2D7 210 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 C6orf99Q4VX62 202 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 C2orf83Q53S99 150 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 N4BP2L1Q5TBK1 243 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 GLT6D1Q7Z4J2 308 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 ATPAF2Q8N5M1 289 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 ATP6V1C2Q8NEY4 427 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 GPR32P1Q8NGA4 272 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR4M2Q8NGB6 313 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR52P1PQ8NH57 321 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR5W2Q8NH69 310 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 DOK4Q8TEW6 326 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 DCAKDQ8WVC6 231 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 TNFAIP8L1Q8WVP5 186 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 SRSF12Q8WXF0 261 aaKnown RBP3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 KCTD7Q96MP8 289 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCDC32Q9BV29 185 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 METTL17Q9H7H0 456 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 LRTM1Q9HBL6 345 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 HMG20AQ9NP66 347 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM100Q9NV29 134 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 JPT1Q9UK76 154 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 DNAJC12Q9UKB3 198 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 FBXO5Q9UKT4 447 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 ANGPT4Q9Y264 503 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 C9orf84Q5VXU9 1444 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 RIMS2Q9UQ26 1411 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 TTC37Q6PGP7 1564 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 PCM1Q15154 2024 aa3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 COL16A1Q07092 1604 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P13-201ENST00000406019 CHD5Q8TDI0 1954 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ADAMTSL3P82987 1691 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 MED23Q9ULK4 1368 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 SETD5Q9C0A6 1442 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCL15-CCL14A0A0B4J2E2 113 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 BPY2O14599 106 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 RAB36O95755 333 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGKV1D-16P01601 117 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 SERPINA7P05543 415 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 BPGMP07738 259 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 MMP7P09237 267 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 LIMS3P0CW19 117 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 LIMS4P0CW20 117 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 HIST1H1CP16403 213 aaKnown RBP3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 GPX2P18283 190 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ALOX5APP20292 161 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 APLNRP35414 380 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR12D2P58182 307 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 SYCNQ0VAF6 134 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 BTN1A1Q13410 526 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCL15Q16663 113 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ARHGAP11BQ3KRB8 267 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 MPV17L2Q567V2 206 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 DNLZQ5SXM8 178 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 NCMAPQ5T1S8 102 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 OGFRL1Q5TC84 451 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 TSPO2Q5TGU0 170 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 SMARCD3Q6STE5 483 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 SSX7Q7RTT5 188 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF283Q8N7M2 679 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR5J2Q8NH18 312 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 SYNPRQ8TBG9 265 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 NT5CQ8TCD5 201 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 CASTOR1Q8WTX7 329 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMEM203Q969S6 136 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZHX1-C8orf76Q96EF9 292 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 CYYR1Q96J86 154 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR4K3Q96R72 315 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 GGTLC1Q9BX51 225 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 PECRQ9BY49 303 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms