RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 POU2AF1Q16633 256 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 C1orf146Q5VVC0 180 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 CASP12Q6UXS9 341 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 SSX8Q7RTT4 187 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZIC4Q8N9L1 334 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 CCDC54Q8NEL0 328 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR4D11Q8NGI4 311 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR5L1Q8NGL2 311 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR6F1Q8NGZ6 308 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 TRUB1Q8WWH5 349 aaKnown RBP4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF300Q96RE9 604 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 MCHR1Q99705 422 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 TAPBPLQ9BX59 468 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 SLC19A3Q9BZV2 496 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 SLC22A4Q9H015 551 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 TMEM27Q9HBJ8 222 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 C12orf4Q9NQ89 552 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF224Q9NZL3 707 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 RPS6KB2Q9UBS0 482 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 RSL24D1Q9UHA3 163 aaKnown RBP4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF107Q9UII5 783 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 AP4S1Q9Y587 144 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 FLVCR1Q9Y5Y0 555 aa4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF469Q96JG9 3925 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 YLPM1P49750 1951 aaKnown RBP4.36□□□□□ -1.71
HMGB3P7-201ENST00000400214 TLN2Q9Y4G6 2542 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 TRAPPC13A5PLN9 417 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 C11orf98E9PRG8 122 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 CXCR6O00574 342 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 MRPS12O15235 138 aaKnown RBP4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 NDUFB8O95169 186 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 GCGP01275 180 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 HLA-AP01891 365 aaKnown RBP4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 BGLAPP02818 100 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 CD74P04233 296 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 TSPAN19P0C672 248 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 LIMS3P0CW19 117 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 LIMS4P0CW20 117 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 IGFBP3P17936 291 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 GGT1P19440 569 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 M6PRP20645 277 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 SERPINA2P20848 420 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 CRYGSP22914 178 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 LOXP28300 417 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 TFPI2P48307 235 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 GSK3BP49841 420 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 HCCSP53701 268 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF154Q13106 437 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 UNC119Q13432 240 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR7A5Q15622 319 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 SPIN3Q5JUX0 258 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 OGFRL1Q5TC84 451 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 FBXW9Q5XUX1 488 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZFP1Q6P2D0 407 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 CREB3L2Q70SY1 520 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 P2RY8Q86VZ1 359 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 CARM1Q86X55 608 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 PUSL1Q8N0Z8 303 aaKnown RBP4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF433Q8N7K0 673 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR2G2Q8NGZ5 317 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 LINC01560Q8TB33 94 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 WWC2-AS2Q96NR7 200 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 SCGB3A2Q96PL1 93 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 PRSS27Q9BQR3 290 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 CDCA4Q9BXL8 241 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 SLC2A9Q9NRM0 540 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF226Q9NYT6 803 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 Q9UF83 564 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZANQ9Y493 2812 aa4.35□□□□□ -1.71
HMGB3P7-201ENST00000400214 CPSF4LA6NMK7 179 aaKnown RBP4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 DEFB108AA8MXU0 73 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 RPL36A-HNRNPH2H7BZ11 118 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 CDIPTO14735 213 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 FFAR1O14842 300 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 MRPL33O75394 65 aaKnown RBP4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF432O94892 652 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 SNAP29O95721 258 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 IGHV2-5P01817 119 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 MELTFP08582 738 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 FRMD6-AS1P0C7T7 363 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 ASAH2BP0C7U1 165 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 T-ENOLP0DO92 83 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 SLC2A2P11168 524 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF250P15622 560 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 TBPP20226 339 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 PVALBP20472 110 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 IGHV1-2P23083 117 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 KIR2DS4P43632 304 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 EIF2B2P49770 351 aaKnown RBP4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 ERFP50548 548 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 IDH3GP51553 393 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 TAS2R31P59538 309 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 HERV-K104P61576 105 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 FAM3AP98173 230 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 AQP6Q13520 282 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF260Q3ZCT1 412 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 LRRN1Q6UXK5 716 aa4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 MRPL52Q86TS9 123 aaKnown RBP4.34□□□□□ -1.71
HMGB3P7-201ENST00000400214 SLC51BQ86UW2 128 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms