RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 KBTBD11O94819 623 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 MPLP40238 635 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 JOSD1Q15040 202 aaPredicted RBP12.26□□□□□ -0.45
COL4A3-202ENST00000396578 RABAC1Q9UI14 185 aa12.26□□□□□ -0.45
COL4A3-202ENST00000396578 EIF3IQ13347 325 aaKnown RBP12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM196Q5HYL7 178 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 CTSVO60911 334 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 RCC1P18754 421 aaPredicted RBP12.25□□□□□ -0.45
COL4A3-202ENST00000396578 SLC35B1P78383 322 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 KLRB1Q12918 225 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 FAM53AQ6NSI3 398 aaPredicted RBP12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM189A5PLL7 270 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 PRSS41Q7RTY9 318 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM30AQ9NV96 361 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 PATE4P0C8F1 98 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 FAM209BQ5JX69 171 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TP53I13Q8NBR0 393 aaPredicted RBP12.25□□□□□ -0.45
COL4A3-202ENST00000396578 ALS2Q96Q42 1657 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 SS18L1O75177 396 aaPredicted RBP12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TSPAN13O95857 204 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 CD3EP07766 207 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 PRSS8Q16651 343 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 IBA57Q5T440 356 aaKnown RBP12.25□□□□□ -0.45
COL4A3-202ENST00000396578 OR10AC1Q8NH08 325 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 ASB5Q8WWX0 329 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TNFSF18Q9UNG2 199 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 MOB4Q9Y3A3 225 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 APC2O95996 2303 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 GUSBP11Q6P575 273 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TDHQ8IZJ6 230 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 AMER3Q8N944 861 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 LSM10Q969L4 123 aaKnown RBP12.25□□□□□ -0.45
COL4A3-202ENST00000396578 WDR34Q96EX3 536 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 VSTM2LQ96N03 204 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 ZNF665Q9H7R5 613 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM210A6NLX4 147 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 METTL12A8MUP2 240 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 ALG14Q96F25 216 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 PGLYRP3Q96LB9 341 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 GUCD1Q96NT3 240 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 REC114Q7Z4M0 266 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 CADM4Q8NFZ8 388 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 OR1P1Q8NH06 330 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM70Q9BUB7 260 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 CDIPTO14735 213 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 MESTQ5EB52 335 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM240Q5SV17 173 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 RGPD3A6NKT7 1758 aaPredicted RBP12.24□□□□□ -0.45
COL4A3-202ENST00000396578 NPIPB6E9PJ23 425 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 NAAAQ02083 359 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 ROM1Q03395 351 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 F12P00748 615 aaPredicted RBP12.24□□□□□ -0.45
COL4A3-202ENST00000396578 OVCH2Q7RTZ1 564 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 MUC1P15941 1255 aaPredicted RBP12.24□□□□□ -0.45
COL4A3-202ENST00000396578 HYAL1Q12794 435 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 KCNMB1Q16558 191 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 LEMD1Q68G75 181 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 SF3B5Q9BWJ5 86 aaKnown RBP12.24□□□□□ -0.45
COL4A3-202ENST00000396578 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 MIXL1Q9H2W2 232 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 NPVFQ9HCQ7 196 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 STAG3L3P0CL85 134 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
COL4A3-202ENST00000396578 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL4A3-202ENST00000396578 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 TRGC2P03986 189 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 P2RX4Q99571 388 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 LEPROTL1O95214 131 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 SPINK14Q6IE38 97 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 MOGAT3Q86VF5 341 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 FANCMQ8IYD8 2048 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 AMY1AP04745 511 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 GABRG2P18507 467 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 SPNS2Q8IVW8 549 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 OR10J6PQ8NGY7 276 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 NUDT16L1Q9BRJ7 211 aaKnown RBP12.23□□□□□ -0.45
COL4A3-202ENST00000396578 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 MMP16P51512 607 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 LGALS3P17931 250 aaKnown RBP12.23□□□□□ -0.45
COL4A3-202ENST00000396578 MAP1LC3AQ9H492 121 aa12.23□□□□□ -0.45
COL4A3-202ENST00000396578 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-202ENST00000396578 LIPT2A6NK58 231 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 HYPMO75409 117 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 CA11O75493 328 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 FOLR2P14207 255 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 RHOVQ96L33 236 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 CHST5Q9GZS9 411 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 SOX21Q9Y651 276 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-202ENST00000396578 ABCA3Q99758 1704 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 DDTP30046 118 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 ECSCRQ19T08 205 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 CBLN3Q6UW01 205 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 SOSTQ9BQB4 213 aa12.22□□□□□ -0.45
COL4A3-202ENST00000396578 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms