RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PEX16Q9Y5Y5 336 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 PNMA8CA0A1B0GUJ8 204 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 IGHG4P01861 327 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 MAS1P04201 325 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 VDAC1P21796 283 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 ADARB1P78563 741 aaKnown RBP13.19□□□□□ -0.3
SMN2-201ENST00000380741 LSAMPQ13449 338 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 OR5M8Q8NGP6 311 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 WWC2-AS2Q96NR7 200 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 SELENOIQ9C0D9 397 aa13.19□□□□□ -0.3
SMN2-201ENST00000380741 RAMP3O60896 148 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 SC5DO75845 299 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 IGF1P05019 195 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 VSIG8P0DPA2 414 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 SLC2A2P11168 524 aaPredicted RBP13.18□□□□□ -0.3
SMN2-201ENST00000380741 MGMTP16455 207 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 MYF6P23409 242 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 MED21Q13503 144 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 GNMTQ14749 295 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 STEAP3Q658P3 488 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 SIGIRRQ6IA17 410 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 TRAT1Q6PIZ9 186 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 LYPD6Q86Y78 171 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 GGHQ92820 318 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 Q96M66 194 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 KCTD7Q96MP8 289 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 DERL3Q96Q80 235 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 TAF9BQ9HBM6 251 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 OR2S2Q9NQN1 319 aa13.18□□□□□ -0.3
SMN2-201ENST00000380741 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
SMN2-201ENST00000380741 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 FAM90A10PA6NDY2 464 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 FAM90A7PA6NKC0 464 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 FAM90A23PA8MXZ1 464 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 LANCL1O43813 399 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 CA11O75493 328 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 CRTAPO75718 401 aaPredicted RBP13.17□□□□□ -0.3
SMN2-201ENST00000380741 FUT3P21217 361 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 PSMB8P28062 276 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 CAPGP40121 348 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 ST3GAL4Q11206 333 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 MMDQ15546 238 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 LRRC36Q1X8D7 754 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 MORN2Q502X0 79 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 TTC23Q5W5X9 447 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 CDH26Q8IXH8 852 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 SETD9Q8NE22 299 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 C4orf3Q8WVX3 66 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 PRR25Q96S07 402 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 MBNL3Q9NUK0 354 aaKnown RBP13.17□□□□□ -0.3
SMN2-201ENST00000380741 ZNF107Q9UII5 783 aaPredicted RBP13.17□□□□□ -0.3
SMN2-201ENST00000380741 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
SMN2-201ENST00000380741 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 TAS2R43P59537 309 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 FHL3Q13643 280 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 DOC2BQ14184 412 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 ODF3L1Q8IXM7 274 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
SMN2-201ENST00000380741 MYOZ3Q8TDC0 251 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 FAM46BQ96A09 425 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 ABHD14AQ9BUJ0 271 aa13.16□□□□□ -0.3
SMN2-201ENST00000380741 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
SMN2-201ENST00000380741 PDCD6O75340 191 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 GLAP06280 429 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 OR5H8P0DN80 308 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 CELP19835 753 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 PPP1CCP36873 323 aaKnown RBP13.15□□□□□ -0.3
SMN2-201ENST00000380741 NKAIN3Q8N8D7 197 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 OR11H1Q8NG94 326 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 RITA1Q96K30 269 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 MRPL20Q9BYC9 149 aaKnown RBP13.15□□□□□ -0.3
SMN2-201ENST00000380741 KCNIP1Q9NZI2 227 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 SCOCQ9UIL1 159 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 JPT1Q9UK76 154 aa13.15□□□□□ -0.3
SMN2-201ENST00000380741 STAB2Q8WWQ8 2551 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 EFCAB10A6NFE3 127 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 G3V318 75 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 CNTFRP26992 372 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 PPIFP30405 207 aaKnown RBP13.14□□□□□ -0.31
SMN2-201ENST00000380741 ECI1P42126 302 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 ACTBP60709 375 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 C6orf141Q5SZD1 244 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 LAIR2Q6ISS4 152 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 ZNF554Q86TJ5 538 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 DHRSXQ8N5I4 330 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 UQCC2Q9BRT2 126 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 KLK15Q9H2R5 256 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 WSB1Q9Y6I7 421 aa13.14□□□□□ -0.31
SMN2-201ENST00000380741 MYL12BO14950 172 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 ATP6V0E1O15342 81 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 CD1AP06126 327 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 GNAO1P09471 354 aa13.13□□□□□ -0.31
SMN2-201ENST00000380741 NHLRC4P0CG21 123 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms