RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 SLC2A8Q9NY64 477 aa12.42□□□□□ -0.42
TCOF1-202ENST00000377797 RGS13O14921 159 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 SS18L1O75177 396 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-202ENST00000377797 CRYGSP22914 178 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 P2RY4P51582 365 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 SLC38A11Q08AI6 406 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 SPACA3Q8IXA5 215 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 ADTRPQ96IZ2 230 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 ACTR3CQ9C0K3 210 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-202ENST00000377797 IL36GQ9NZH8 169 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 OPN1MWP04001 364 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 OPN1MW2P0DN77 364 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 OPN1MW3P0DN78 364 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 H2BFSP57053 126 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 ZNF787Q6DD87 383 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 Q9N2K0 584 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 GYPAP02724 150 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 BATFQ16520 125 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 ACOT6Q3I5F7 207 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-202ENST00000377797 CISD1Q9NZ45 108 aaKnown RBP12.41□□□□□ -0.42
TCOF1-202ENST00000377797 A0A1W2PPE3 182 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 ZNF705GA8MUZ8 300 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-202ENST00000377797 ZBTB34Q8NCN2 500 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 RHOFQ9HBH0 211 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 RPH3ALQ9UNE2 315 aa12.41□□□□□ -0.42
TCOF1-202ENST00000377797 MBP02144 154 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 P2RX3P56373 397 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 KLRB1Q12918 225 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 OR1L1Q8NH94 360 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 OTOGLQ3ZCN5 2332 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 ETV2O00321 342 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-202ENST00000377797 DIRC2Q96SL1 478 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 HSD17B10Q99714 261 aaKnown RBP12.4□□□□□ -0.42
TCOF1-202ENST00000377797 MTCH1Q9NZJ7 389 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 SLC25A10Q9UBX3 287 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-202ENST00000377797 TNFSF18Q9UNG2 199 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 A0A0B4J293 547 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 MED19A0JLT2 244 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-202ENST00000377797 KCNAB3O43448 404 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 P2RY1P47900 373 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 RXFP4Q8TDU9 374 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
TCOF1-202ENST00000377797 WNT9BO14905 357 aa12.4□□□□□ -0.43
TCOF1-202ENST00000377797 SCAF4O95104 1147 aaKnown RBP12.4□□□□□ -0.43
TCOF1-202ENST00000377797 CXCL2P19875 107 aa12.4□□□□□ -0.43
TCOF1-202ENST00000377797 ANKRD55Q3KP44 614 aa12.4□□□□□ -0.43
TCOF1-202ENST00000377797 AVPI1Q5T686 147 aa12.4□□□□□ -0.43
TCOF1-202ENST00000377797 ETV3LQ6ZN32 361 aa12.4□□□□□ -0.43
TCOF1-202ENST00000377797 PAQR4Q8N4S7 273 aaPredicted RBP12.4□□□□□ -0.43
TCOF1-202ENST00000377797 OR11H4Q8NGC9 324 aa12.4□□□□□ -0.43
TCOF1-202ENST00000377797 PRRX1P54821 245 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 DEFA6Q01524 100 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 MIDNQ504T8 468 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 Q5BKY6 102 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 ABHD14BQ96IU4 210 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 C19orf12Q9NSK7 152 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 IGHV2OR16-5A0A0B4J2B6 119 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 ADIRFQ15847 76 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 SNX22Q96L94 193 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 UBTD1Q9HAC8 227 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 PROK2Q9HC23 129 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 FBLN5Q9UBX5 448 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 ODAMA1E959 279 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 OR5G3P0C626 314 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 CT45A6P0DMU7 189 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 CT45A5P0DMU8 189 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 CT45A7P0DMV0 189 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 G6PCP35575 357 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 TAGLN2P37802 199 aaKnown RBP12.39□□□□□ -0.43
TCOF1-202ENST00000377797 KIR2DS2P43631 304 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 CT45A1Q5HYN5 189 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 CT45A3Q8NHU0 189 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 POM121Q96HA1 1249 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 ACY3Q96HD9 319 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 RAXQ9Y2V3 346 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 A0A1W2PRD5 423 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 A0A1W2PRF3 423 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 A0A1W2PRM7 423 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 C5orf63A6NC05 138 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 SLC25A6P12236 298 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 TDGF1P13385 188 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 OR2B8PP59922 312 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 FOXF2Q12947 444 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 ZCCHC14Q8WYQ9 949 aaKnown RBP12.39□□□□□ -0.43
TCOF1-202ENST00000377797 MED9Q9NWA0 146 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 CLN8Q9UBY8 286 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 IL19Q9UHD0 177 aa12.39□□□□□ -0.43
TCOF1-202ENST00000377797 HIST3H3Q16695 136 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 TMEM56Q96MV1 263 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 FAM96BQ9Y3D0 163 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 DLL1O00548 723 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 SCO1O75880 301 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 SLC25A4P12235 298 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 TMEM65Q6PI78 240 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 CRYM-AS1A6NIL9 109 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 RRASP10301 218 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 GLIPR1P48060 266 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 UBAC2Q8NBM4 344 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 OR8B3Q8NGG8 313 aa12.38□□□□□ -0.43
TCOF1-202ENST00000377797 OR8B2Q96RD0 313 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms