RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SMIM14Q96QK8 99 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 GGACTQ9BVM4 153 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 TMEM140Q9NV12 185 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 ZNF665Q9H7R5 613 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 KIAA1549Q9HCM3 1950 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 GSN-AS1Q9NRJ2 163 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 WIPI2Q9Y4P8 454 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 C7orf77A4D0Y5 90 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 TCTN1Q2MV58 587 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 TEPPQ6URK8 271 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 SH2D5Q6ZV89 423 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 NUP37Q8NFH4 326 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 ZNF519Q8TB69 540 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 MSL2Q9HCI7 577 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 CLN8Q9UBY8 286 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 A0A1W2PS18 150 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 CXCL13O43927 109 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 GREB1LQ9C091 1923 aaPredicted RBP7.39□□□□□ -1.23
HSPG2-203ENST00000374695 LIPFP07098 398 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 AGERQ15109 404 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 PRSS8Q16651 343 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 TRBV5-4A0A0C4DH59 114 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 CA6P23280 308 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 CKS2P33552 79 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 C10orf128Q5T292 105 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 LDLRAD1Q5T700 205 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 RFLNAQ6ZTI6 216 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 FAM169BQ8N8A8 192 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 RNF122Q9H9V4 155 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 HMGA2P52926 109 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 EBLN2Q6P2I7 272 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 LRRC29Q8WV35 223 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 KCNE3Q9Y6H6 103 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 FRMPD3Q5JV73 1810 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 CYB5R3P00387 301 aaPredicted RBP7.39□□□□□ -1.23
HSPG2-203ENST00000374695 RELQ04864 619 aaPredicted RBP7.39□□□□□ -1.23
HSPG2-203ENST00000374695 HARBI1Q96MB7 349 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 ALKBH7Q9BT30 221 aaPredicted RBP7.39□□□□□ -1.23
HSPG2-203ENST00000374695 GPR27Q9NS67 375 aa7.39□□□□□ -1.23
HSPG2-203ENST00000374695 DNAJB12Q9NXW2 375 aaKnown RBP7.39□□□□□ -1.23
HSPG2-203ENST00000374695 HOXD4P09016 255 aaPredicted RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SEC11BP0C7V7 166 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ZNF250P15622 560 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 CA5BP1Q8WTZ4 195 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SELENOTP62341 195 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SMAD4Q13485 552 aaKnown RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 DEFB109BQ30KR1 87 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 CLDN16Q9Y5I7 305 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 KBTBD11O94819 623 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 TNFSF15O95150 251 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 FOLR2P14207 255 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 GALNT14Q96FL9 552 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 HLA-DRB1P01911 266 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SRFP11831 508 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 DENND4CQ5VZ89 1909 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 FCMRO60667 390 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 MRPS11P82912 194 aaKnown RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 CLEC18BQ6UXF7 455 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ZNF841Q6ZN19 808 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 OR4X1Q8NH49 305 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 PEF1Q9UBV8 284 aaKnown RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 DEFB108AA8MXU0 73 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 IGHV3-64DA0A0J9YX35 117 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SIPA1L1O43166 1804 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 TMEM189A5PLL7 270 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SLC25A34Q6PIV7 304 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 OLIG3Q7RTU3 272 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SSMEM1Q8WWF3 244 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 FGF22Q9HCT0 170 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 OPN4Q9UHM6 478 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 MUC4Q99102 2169 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 A8MXK9 166 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 CFDP00746 253 aaPredicted RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 MRPL58Q14197 206 aaKnown RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ZNF774Q6NX45 483 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 PRNTQ86SH4 94 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ZNF683Q8IZ20 524 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 PAXXQ9BUH6 204 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ARG1P05089 322 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 MAS1LP35410 378 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 LSM6P62312 80 aaKnown RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 CXorf67Q86X51 503 aaPredicted RBP7.38□□□□□ -1.23
HSPG2-203ENST00000374695 OR10AG1Q8NH19 301 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ASB10Q8WXI3 467 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ABHD1Q96SE0 405 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 C2orf16Q68DN1 1984 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 HMX2A2RU54 273 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 NPIPB9F8W1W9 429 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 HYPMO75409 117 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 SKP2Q13309 424 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 TM4SF20Q53R12 229 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 PRSS36Q5K4E3 855 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 ETFBKMTQ8IXQ9 262 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 FAM222BQ8WU58 562 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 RND1Q92730 232 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 C8orf44Q96CB5 159 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 PLXNA3P51805 1871 aa7.38□□□□□ -1.23
HSPG2-203ENST00000374695 TCRBV5S1A1TA0A578 114 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms