RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 IFI6P09912 130 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 MEOX1P50221 254 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 NDUFB4O95168 129 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 WASHC3Q9Y3C0 194 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 TDRD15B5MCY1 1934 aaKnown RBP13.83□□□□□ -0.19
COL17A1-202ENST00000369733 PLXNB2O15031 1838 aa13.83□□□□□ -0.19
COL17A1-202ENST00000369733 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 LOC102724200A0A096LPH7 203 aaPredicted RBP13.83□□□□□ -0.2
COL17A1-202ENST00000369733 LINC00587B1AMM8 73 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 SIAH2O43255 324 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 LYZL6O75951 148 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 CCL3P10147 92 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 RPS11P62280 158 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL17A1-202ENST00000369733 LRRC3CA6NJW4 275 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 TMEM14DPA8MWL7 114 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 GLRX5Q86SX6 157 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 TUSC5Q8IXB3 177 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 SCTP09683 121 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 SMIM10L1P0DMW3 83 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 RPL24P83731 157 aaKnown RBP13.83□□□□□ -0.2
COL17A1-202ENST00000369733 WDFY1Q8IWB7 410 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 SELENOHQ8IZQ5 122 aaKnown RBP13.83□□□□□ -0.2
COL17A1-202ENST00000369733 TIMD4Q96H15 378 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 SMIM10Q96HG1 83 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 TREM2Q9NZC2 230 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 FAM87AP0C7U9 286 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 TRA2AQ13595 282 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL17A1-202ENST00000369733 TMEM251Q8N6I4 163 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 ADTRPQ96IZ2 230 aa13.83□□□□□ -0.2
COL17A1-202ENST00000369733 MS4A18H0YCH9 400 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 NDUFB3O43676 98 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 MRPS11P82912 194 aaKnown RBP13.82□□□□□ -0.2
COL17A1-202ENST00000369733 MS4A18Q3C1V0 323 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 OR1B1Q8NGR6 318 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 CTHRC1Q96CG8 243 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 OR6C3Q9NZP0 311 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 LHFPL6Q9Y693 200 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 TNFSF15O95150 251 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 TMEM187Q14656 261 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 LRRC10Q5BKY1 277 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 FAM27BQ5VT28 67 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF488Q96MN9 340 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 CA11O75493 328 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 SUCLG1P53597 346 aaKnown RBP13.82□□□□□ -0.2
COL17A1-202ENST00000369733 GAB4Q2WGN9 574 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 TEPPQ6URK8 271 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 ABHD3Q8WU67 409 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 CBLN4Q9NTU7 201 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF236Q9UL36 1845 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 P01737 135 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 IL9P15248 144 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 CD1BP29016 333 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 LRRC75AQ8NAA5 344 aa13.82□□□□□ -0.2
COL17A1-202ENST00000369733 KIAA0100Q14667 2235 aaKnown RBP13.81□□□□□ -0.2
COL17A1-202ENST00000369733 A0A1W2PN81 502 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 C3orf80F5H4A9 247 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 SPATA45Q537H7 98 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 WDR74Q6RFH5 385 aaPredicted RBP13.81□□□□□ -0.2
COL17A1-202ENST00000369733 OR2D3Q8NGH3 330 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 ABHD14AQ9BUJ0 271 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 LIFP15018 202 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 GAMTQ14353 236 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 SLC25A47Q6Q0C1 308 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 TAF15Q92804 592 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL17A1-202ENST00000369733 SMPD2O60906 423 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 PRF1P14222 555 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 TNFRSF1AP19438 455 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF83P51522 516 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 HIKESHIQ53FT3 197 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF738Q8NE65 137 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 SCGB1C2P0DMR2 95 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF766Q5HY98 468 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 SPINK14Q6IE38 97 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 OR4B1Q8NGF8 309 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 GPR146Q96CH1 333 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 NRXN2Q9P2S2 1712 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 DHRS7CA6NNS2 312 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 ISLRO14498 428 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 PGLYRP1O75594 196 aaPredicted RBP13.8□□□□□ -0.2
COL17A1-202ENST00000369733 FOXL2P58012 376 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 Q1RN00 199 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 A0A1W2PQF6 199 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF785A8K8V0 405 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 SSPNQ14714 243 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 TINAGQ9UJW2 476 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 NPY1RP25929 384 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 FGF12P61328 243 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 EGR4Q05215 589 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 LINC00469Q8N7U9 141 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 GPHA2Q96T91 129 aa13.8□□□□□ -0.2
COL17A1-202ENST00000369733 IGSF23A1L1A6 192 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 PRRG2O14669 202 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 LYZP61626 148 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF638Q14966 1978 aaKnown RBP13.79□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF646O15015 1829 aaPredicted RBP13.79□□□□□ -0.2
COL17A1-202ENST00000369733 HINT1P49773 126 aaPredicted RBP13.79□□□□□ -0.2
COL17A1-202ENST00000369733 SLC35B1P78383 322 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 PSG4Q00888 419 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms