RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TNFSF18Q9UNG2 199 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ALG5Q9Y673 324 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TRAV1-1A0A0B4J248 108 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGHV3OR16-9A0A0B4J2B5 98 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TVP23AA6NH52 213 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 SULT2B1O00204 365 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 BHLHE40O14503 412 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TAX1BP3O14907 124 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR10H3O60404 316 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 JTBO76095 146 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TDP2O95551 362 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGLV3-1P01715 115 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 CD70P32970 193 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 G6PCP35575 357 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 CYP2J2P51589 502 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 GPR17Q13304 367 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 KRT81Q14533 505 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ARMCX4Q5H9R4 360 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TMEM78Q5T7P6 136 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ANKRD22Q5VYY1 191 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 KCTD18Q6PI47 426 aaPredicted RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 SLC25A26Q70HW3 274 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 SLC37A3Q8NCC5 494 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR10H4Q8NGA5 316 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR11L1Q8NGX0 322 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TIMD4Q96H15 378 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 PPP1R36Q96LQ0 422 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF2Q9BSG1 426 aaPredicted RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 VCXQ9H320 206 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TAS2R9Q9NYW1 312 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 COPZ2Q9P299 210 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ST3GAL6Q9Y274 331 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 KLK5Q9Y337 293 aaPredicted RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 COLEC10Q9Y6Z7 277 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF593O00488 134 aaPredicted RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ANGPTL7O43827 346 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 HUS1O60921 280 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 EEDO75530 441 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 RPP14O95059 124 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGLV3-25P01717 112 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 DBTP11182 482 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 CD58P19256 250 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TSPOP30536 169 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 GDF5P43026 501 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 RPL32P62910 135 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 PDIA2Q13087 525 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 C9orf135Q5VTT2 229 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 MOB3BQ86TA1 216 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 HYLS1Q96M11 299 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF382Q96SR6 550 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 LINC01587Q99440 93 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 SLC29A3Q9BZD2 475 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 PLA2G2FQ9BZM2 168 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 RNF121Q9H920 327 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 FAM49BQ9NUQ9 324 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR1A1Q9P1Q5 309 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 DSCAMO60469 2012 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 DOCK9Q9BZ29 2069 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 INAFM1C9JVW0 142 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 CDC40O60508 579 aaKnown RBP eCLIP1.32□□□□□ -2.24e-6■■□□□ 12.3
SMARCAD1-202ENST00000359052 IFNA21P01568 189 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF708P17019 499 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 PSMB1P20618 241 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 COL8A2P25067 703 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 HMGB2P26583 209 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 HTR1FP30939 366 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 IL2RGP31785 369 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 AVPR1BP47901 424 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 SNRPEP62304 92 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 RPS28P62857 69 aaKnown RBP1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TTLL9Q3SXZ7 439 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 HSP90AA5PQ58FG0 334 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 C11orf87Q6NUJ2 197 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 CALHM1Q8IU99 346 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 C4orf33Q8N1A6 199 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 RFLNBQ8N5W9 214 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR4D6Q8NGJ1 314 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR9A2Q8NGT5 310 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 SDR42E1Q8WUS8 393 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 PYDC1Q8WXC3 89 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF524Q96C55 264 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 FAM173AQ9BQD7 235 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 ULBP2Q9BZM5 246 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 RNF167Q9H6Y7 350 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 INSIG2Q9Y5U4 225 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 TACC2O95359 2948 aa1.32□□□□□ -2.2
SMARCAD1-202ENST00000359052 YJEFN3A6XGL0 299 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 D6RAR5 112 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 C5orf67F2Z3F1 127 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 DCTN6O00399 190 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 HPGDSO60760 199 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 SNAPC5O75971 98 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 TNFSF15O95150 251 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 CATP04040 527 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 H1F0P07305 194 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 IDH3GP51553 393 aaPredicted RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 PKIAP61925 76 aa1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 RPS23P62266 143 aaKnown RBP1.31□□□□□ -2.2
SMARCAD1-202ENST00000359052 TRAF2Q12933 501 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms